Cluster: MGYG000002025_CGC16
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000002025
- CGC Family ID: CGCFAM_00007
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002025_14 | MGYG000002025_14_20 | 18977 | 19765 | + | 3.A.1.103.4 |
| TC | MGYG000002025_14 | MGYG000002025_14_21 | 19874 | 21808 | + | 3.A.1.103.1 |
| pfam | MGYG000002025_14 | MGYG000002025_14_22 | 21993 | 23177 | + | UDPG_MGDP_dh | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N |
| CAZyme | MGYG000002025_14 | MGYG000002025_14_23 | 23204 | 25063 | + | GT2 |
| CAZyme | MGYG000002025_14 | MGYG000002025_14_24 | 25173 | 26282 | + | GT2 |
| CAZyme | MGYG000002025_14 | MGYG000002025_14_25 | 26316 | 28499 | + | GT2 | GT2 |
Gene ID: MGYG000002025_14_20
Type: TC
Location: 18977 - 19765 (+)
Type: TC
Location: 18977 - 19765 (+)
Gene ID: MGYG000002025_14_21
Type: TC
Location: 19874 - 21808 (+)
Type: TC
Location: 19874 - 21808 (+)
Gene ID: MGYG000002025_14_22
Type: pfam
Location: 21993 - 23177 (+)
Type: pfam
Location: 21993 - 23177 (+)
Gene ID: MGYG000002025_14_23
Type: CAZyme
Location: 23204 - 25063 (+)
Type: CAZyme
Location: 23204 - 25063 (+)
Gene ID: MGYG000002025_14_24
Type: CAZyme
Location: 25173 - 26282 (+)
Type: CAZyme
Location: 25173 - 26282 (+)
Gene ID: MGYG000002025_14_25
Type: CAZyme
Location: 26316 - 28499 (+)
Type: CAZyme
Location: 26316 - 28499 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Merdiplasma
Species
Merdiplasma sp905207905
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.