Cluster: MGYG000002022_CGC1
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 4
- Substrate:
- Genome ID: MGYG000002022
- CGC Family ID: CGCFAM_02242
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002022_1 | MGYG000002022_1_102 | 99671 | 102136 | + | GT35 |
| CAZyme | MGYG000002022_1 | MGYG000002022_1_103 | 102172 | 104580 | + | CBM48 | GH13_9 |
| CAZyme | MGYG000002022_1 | MGYG000002022_1_104 | 104698 | 106143 | + | GT5 |
| CAZyme | MGYG000002022_1 | MGYG000002022_1_105 | 106297 | 109746 | + | GH13_39 | GH77 |
| NULL(UNKNOWN) | MGYG000002022_1 | MGYG000002022_1_106 | 109930 | 110409 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | MGYG000002022_1 | MGYG000002022_1_107 | 110485 | 111201 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000002022_1 | MGYG000002022_1_108 | 111198 | 112847 | - | 3.A.1.106.11 |
| TC | MGYG000002022_1 | MGYG000002022_1_109 | 112844 | 114481 | - | 3.A.1.129.1 |
| TC | MGYG000002022_1 | MGYG000002022_1_110 | 114494 | 115510 | - | 3.D.4.3.2 |
| TC | MGYG000002022_1 | MGYG000002022_1_111 | 115510 | 116883 | - | 3.D.4.3.2 |
| TC | MGYG000002022_1 | MGYG000002022_1_112 | 117060 | 118412 | - | 3.A.3.5.15 |
Gene ID: MGYG000002022_1_102
Type: CAZyme
Location: 99671 - 102136 (+)
Type: CAZyme
Location: 99671 - 102136 (+)
Gene ID: MGYG000002022_1_103
Type: CAZyme
Location: 102172 - 104580 (+)
Type: CAZyme
Location: 102172 - 104580 (+)
Gene ID: MGYG000002022_1_104
Type: CAZyme
Location: 104698 - 106143 (+)
Type: CAZyme
Location: 104698 - 106143 (+)
Gene ID: MGYG000002022_1_105
Type: CAZyme
Location: 106297 - 109746 (+)
Type: CAZyme
Location: 106297 - 109746 (+)
Gene ID: MGYG000002022_1_106
Type:
Location: 109930 - 110409 (+)
Type:
Location: 109930 - 110409 (+)
Gene ID: MGYG000002022_1_107
Type:
Location: 110485 - 111201 (-)
Type:
Location: 110485 - 111201 (-)
Gene ID: MGYG000002022_1_108
Type: TC
Location: 111198 - 112847 (-)
Type: TC
Location: 111198 - 112847 (-)
Gene ID: MGYG000002022_1_109
Type: TC
Location: 112844 - 114481 (-)
Type: TC
Location: 112844 - 114481 (-)
Gene ID: MGYG000002022_1_110
Type: TC
Location: 114494 - 115510 (-)
Type: TC
Location: 114494 - 115510 (-)
Gene ID: MGYG000002022_1_111
Type: TC
Location: 115510 - 116883 (-)
Type: TC
Location: 115510 - 116883 (-)
Gene ID: MGYG000002022_1_112
Type: TC
Location: 117060 - 118412 (-)
Type: TC
Location: 117060 - 118412 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Selenomonadales
Family
Selenomonadaceae
Genus
Centipeda
Species
Centipeda artemidis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.