Cluster: MGYG000002014_CGC8
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000002014
- CGC Family ID: CGCFAM_00807
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002014_14 | MGYG000002014_14_3 | 3082 | 3936 | - | 3.A.1.103.4 |
| pfam | MGYG000002014_14 | MGYG000002014_14_4 | 3949 | 4704 | - | ABC2_membrane |
| CAZyme | MGYG000002014_14 | MGYG000002014_14_5 | 4701 | 6749 | - | GT2 |
| CAZyme | MGYG000002014_14 | MGYG000002014_14_6 | 6740 | 7909 | - | GT4 |
| STP | MGYG000002014_14 | MGYG000002014_14_7 | 8055 | 9695 | + | CBS | CBS |
| pfam | MGYG000002014_14 | MGYG000002014_14_8 | 9714 | 11168 | - | PMT_2 |
| CAZyme | MGYG000002014_14 | MGYG000002014_14_9 | 11332 | 12054 | + | GT2 |
| NULL(UNKNOWN) | MGYG000002014_14 | MGYG000002014_14_10 | 12321 | 12518 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | MGYG000002014_14 | MGYG000002014_14_11 | 12776 | 13246 | - | Acetyltransf_1 | Acetyltransf_4 | Acetyltransf_7 | Acetyltransf_10 |
| TC | MGYG000002014_14 | MGYG000002014_14_12 | 13261 | 13911 | - | 2.A.115.2.8 |
Gene ID: MGYG000002014_14_3
Type: TC
Location: 3082 - 3936 (-)
Type: TC
Location: 3082 - 3936 (-)
Gene ID: MGYG000002014_14_4
Type: pfam
Location: 3949 - 4704 (-)
Type: pfam
Location: 3949 - 4704 (-)
Gene ID: MGYG000002014_14_5
Type: CAZyme
Location: 4701 - 6749 (-)
Type: CAZyme
Location: 4701 - 6749 (-)
Gene ID: MGYG000002014_14_6
Type: CAZyme
Location: 6740 - 7909 (-)
Type: CAZyme
Location: 6740 - 7909 (-)
Gene ID: MGYG000002014_14_7
Type: STP
Location: 8055 - 9695 (+)
Type: STP
Location: 8055 - 9695 (+)
Gene ID: MGYG000002014_14_8
Type: pfam
Location: 9714 - 11168 (-)
Type: pfam
Location: 9714 - 11168 (-)
Gene ID: MGYG000002014_14_9
Type: CAZyme
Location: 11332 - 12054 (+)
Type: CAZyme
Location: 11332 - 12054 (+)
Gene ID: MGYG000002014_14_10
Type:
Location: 12321 - 12518 (-)
Type:
Location: 12321 - 12518 (-)
Gene ID: MGYG000002014_14_11
Type: pfam
Location: 12776 - 13246 (-)
Type: pfam
Location: 12776 - 13246 (-)
Gene ID: MGYG000002014_14_12
Type: TC
Location: 13261 - 13911 (-)
Type: TC
Location: 13261 - 13911 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Merdibacter
Species
Merdibacter merdavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.