Cluster: MGYG000002013_CGC6
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002013
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002013_3 | MGYG000002013_3_73 | 86350 | 89358 | + | GH2 |
| NULL(UNKNOWN) | MGYG000002013_3 | MGYG000002013_3_74 | 89362 | 89817 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000002013_3 | MGYG000002013_3_75 | 89971 | 91434 | + | 2.A.3.7.4 |
| STP | MGYG000002013_3 | MGYG000002013_3_76 | 91856 | 92104 | + | PTS-HPr |
| STP | MGYG000002013_3 | MGYG000002013_3_77 | 92293 | 92535 | + | FeoA |
| TC | MGYG000002013_3 | MGYG000002013_3_78 | 92576 | 92797 | + | 9.A.8.1.6 |
| TC | MGYG000002013_3 | MGYG000002013_3_79 | 92921 | 95248 | + | 9.A.8.1.6 |
Gene ID: MGYG000002013_3_73
Type: CAZyme
Location: 86350 - 89358 (+)
Type: CAZyme
Location: 86350 - 89358 (+)
Gene ID: MGYG000002013_3_74
Type:
Location: 89362 - 89817 (+)
Type:
Location: 89362 - 89817 (+)
Gene ID: MGYG000002013_3_75
Type: TC
Location: 89971 - 91434 (+)
Type: TC
Location: 89971 - 91434 (+)
Gene ID: MGYG000002013_3_76
Type: STP
Location: 91856 - 92104 (+)
Type: STP
Location: 91856 - 92104 (+)
Gene ID: MGYG000002013_3_77
Type: STP
Location: 92293 - 92535 (+)
Type: STP
Location: 92293 - 92535 (+)
Gene ID: MGYG000002013_3_78
Type: TC
Location: 92576 - 92797 (+)
Type: TC
Location: 92576 - 92797 (+)
Gene ID: MGYG000002013_3_79
Type: TC
Location: 92921 - 95248 (+)
Type: TC
Location: 92921 - 95248 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp900754745
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.