Cluster: MGYG000001998_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000001998
- CGC Family ID: CGCFAM_00159
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000001998_3 | MGYG000001998_3_26 | 28230 | 29597 | + | GH28 |
| pfam | MGYG000001998_3 | MGYG000001998_3_27 | 29726 | 30085 | - | PilZ |
| TF | MGYG000001998_3 | MGYG000001998_3_28 | 30104 | 31366 | - | HTH_AraC | HTH_AraC |
| TC | MGYG000001998_3 | MGYG000001998_3_29 | 31583 | 32983 | + | 2.A.2.3.1 |
| CAZyme | MGYG000001998_3 | MGYG000001998_3_30 | 33047 | 35281 | + | GH2 |
Gene ID: MGYG000001998_3_26
Type: CAZyme
Location: 28230 - 29597 (+)
Type: CAZyme
Location: 28230 - 29597 (+)
Gene ID: MGYG000001998_3_27
Type: pfam
Location: 29726 - 30085 (-)
Type: pfam
Location: 29726 - 30085 (-)
Gene ID: MGYG000001998_3_28
Type: TF
Location: 30104 - 31366 (-)
Type: TF
Location: 30104 - 31366 (-)
Gene ID: MGYG000001998_3_29
Type: TC
Location: 31583 - 32983 (+)
Type: TC
Location: 31583 - 32983 (+)
Gene ID: MGYG000001998_3_30
Type: CAZyme
Location: 33047 - 35281 (+)
Type: CAZyme
Location: 33047 - 35281 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Species
Lachnospira sp900552795
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.