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Cluster: MGYG000001998_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000001998_3 MGYG000001998_3_7 6336 7808 + 2.A.22.5.3
TC MGYG000001998_3 MGYG000001998_3_8 7842 8660 + 3.A.1.132.3
TF MGYG000001998_3 MGYG000001998_3_9 8996 9394 + HTH_5
STP MGYG000001998_3 MGYG000001998_3_10 9399 9617 + HMA
TC MGYG000001998_3 MGYG000001998_3_11 9632 11515 + 3.A.3.6.10
pfam MGYG000001998_3 MGYG000001998_3_12 11519 12784 + Glyco_trans_1_2
NULL(UNKNOWN) MGYG000001998_3 MGYG000001998_3_13 12781 12891 + NULL(UNKNOWN)
[View Structural Homologs]
TC MGYG000001998_3 MGYG000001998_3_14 12970 14157 + 2.A.1.15.18
TC MGYG000001998_3 MGYG000001998_3_15 14186 15562 + 2.A.66.1.33
STP MGYG000001998_3 MGYG000001998_3_16 15540 17477 + GGDEF | dCache_1
CAZyme MGYG000001998_3 MGYG000001998_3_17 17593 18534 - CE4
Gene ID: MGYG000001998_3_7
Type: TC
Location: 6336 - 7808 (+)
Gene ID: MGYG000001998_3_8
Type: TC
Location: 7842 - 8660 (+)
Gene ID: MGYG000001998_3_9
Type: TF
Location: 8996 - 9394 (+)
Gene ID: MGYG000001998_3_10
Type: STP
Location: 9399 - 9617 (+)
Gene ID: MGYG000001998_3_11
Type: TC
Location: 9632 - 11515 (+)
Gene ID: MGYG000001998_3_12
Type: pfam
Location: 11519 - 12784 (+)
Gene ID: MGYG000001998_3_13
Type:
Location: 12781 - 12891 (+)
Gene ID: MGYG000001998_3_14
Type: TC
Location: 12970 - 14157 (+)
Gene ID: MGYG000001998_3_15
Type: TC
Location: 14186 - 15562 (+)
Gene ID: MGYG000001998_3_16
Type: STP
Location: 15540 - 17477 (+)
Gene ID: MGYG000001998_3_17
Type: CAZyme
Location: 17593 - 18534 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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