Cluster: MGYG000001998_CGC4
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000001998
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000001998_2 | MGYG000001998_2_128 | 144321 | 144734 | + | 2.A.7.2.1 |
| pfam | MGYG000001998_2 | MGYG000001998_2_129 | 144780 | 145607 | - | DegV |
| STP | MGYG000001998_2 | MGYG000001998_2_130 | 145849 | 146367 | + | TetR_N |
| CAZyme | MGYG000001998_2 | MGYG000001998_2_131 | 146632 | 148731 | + | GH36 |
| CAZyme | MGYG000001998_2 | MGYG000001998_2_132 | 148736 | 150076 | + | GH28 |
| TC | MGYG000001998_2 | MGYG000001998_2_133 | 150255 | 151247 | + | 9.B.18.2.1 |
Gene ID: MGYG000001998_2_128
Type: TC
Location: 144321 - 144734 (+)
Type: TC
Location: 144321 - 144734 (+)
Gene ID: MGYG000001998_2_129
Type: pfam
Location: 144780 - 145607 (-)
Type: pfam
Location: 144780 - 145607 (-)
Gene ID: MGYG000001998_2_130
Type: STP
Location: 145849 - 146367 (+)
Type: STP
Location: 145849 - 146367 (+)
Gene ID: MGYG000001998_2_131
Type: CAZyme
Location: 146632 - 148731 (+)
Type: CAZyme
Location: 146632 - 148731 (+)
Gene ID: MGYG000001998_2_132
Type: CAZyme
Location: 148736 - 150076 (+)
Type: CAZyme
Location: 148736 - 150076 (+)
Gene ID: MGYG000001998_2_133
Type: TC
Location: 150255 - 151247 (+)
Type: TC
Location: 150255 - 151247 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Species
Lachnospira sp900552795
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.