Cluster: MGYG000001998_CGC25
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000001998
- CGC Family ID: CGCFAM_00075
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000001998_20 | MGYG000001998_20_3 | 1962 | 2906 | - | GT2 |
| TC | MGYG000001998_20 | MGYG000001998_20_4 | 2944 | 3582 | - | 1.B.52.2.2 |
| STP | MGYG000001998_20 | MGYG000001998_20_5 | 3599 | 4978 | - | AAA |
| NULL(UNKNOWN) | MGYG000001998_20 | MGYG000001998_20_6 | 5143 | 5556 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000001998_20 | MGYG000001998_20_7 | 5661 | 8117 | - | 3.A.9.1.2 |
Gene ID: MGYG000001998_20_3
Type: CAZyme
Location: 1962 - 2906 (-)
Type: CAZyme
Location: 1962 - 2906 (-)
Gene ID: MGYG000001998_20_4
Type: TC
Location: 2944 - 3582 (-)
Type: TC
Location: 2944 - 3582 (-)
Gene ID: MGYG000001998_20_5
Type: STP
Location: 3599 - 4978 (-)
Type: STP
Location: 3599 - 4978 (-)
Gene ID: MGYG000001998_20_6
Type:
Location: 5143 - 5556 (-)
Type:
Location: 5143 - 5556 (-)
Gene ID: MGYG000001998_20_7
Type: TC
Location: 5661 - 8117 (-)
Type: TC
Location: 5661 - 8117 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Species
Lachnospira sp900552795
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.