Cluster: MGYG000001998_CGC23
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000001998
- CGC Family ID: CGCFAM_01465
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000001998_17 | MGYG000001998_17_27 | 28653 | 30482 | - | GH13_11 |
| TC | MGYG000001998_17 | MGYG000001998_17_28 | 30469 | 31956 | - | 2.A.2.1.1 |
| pfam | MGYG000001998_17 | MGYG000001998_17_29 | 31959 | 32852 | - | Radical_SAM | Fer4_12 |
| peptidase | MGYG000001998_17 | MGYG000001998_17_30 | 32867 | 33568 | - | S14.UPW |
| TC | MGYG000001998_17 | MGYG000001998_17_31 | 33856 | 34620 | + | 3.A.1.16.1 |
Gene ID: MGYG000001998_17_27
Type: CAZyme
Location: 28653 - 30482 (-)
Type: CAZyme
Location: 28653 - 30482 (-)
Gene ID: MGYG000001998_17_28
Type: TC
Location: 30469 - 31956 (-)
Type: TC
Location: 30469 - 31956 (-)
Gene ID: MGYG000001998_17_29
Type: pfam
Location: 31959 - 32852 (-)
Type: pfam
Location: 31959 - 32852 (-)
Gene ID: MGYG000001998_17_30
Type: peptidase
Location: 32867 - 33568 (-)
Type: peptidase
Location: 32867 - 33568 (-)
Gene ID: MGYG000001998_17_31
Type: TC
Location: 33856 - 34620 (+)
Type: TC
Location: 33856 - 34620 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Species
Lachnospira sp900552795
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.