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Cluster: MGYG000001998_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000001998_2 MGYG000001998_2_19 20463 22934 + GT35
NULL(UNKNOWN) MGYG000001998_2 MGYG000001998_2_20 23134 24084 + NULL(UNKNOWN)
[View Structural Homologs]
STP MGYG000001998_2 MGYG000001998_2_21 24145 24924 + Peptidase_M23
CAZyme MGYG000001998_2 MGYG000001998_2_22 25152 26462 + GH13_20
TC MGYG000001998_2 MGYG000001998_2_23 26463 27131 - 1.C.113.1.3
TC MGYG000001998_2 MGYG000001998_2_24 27554 28015 + 1.A.22.1.3
pfam MGYG000001998_2 MGYG000001998_2_25 28117 28566 + DUF2752
NULL(UNKNOWN) MGYG000001998_2 MGYG000001998_2_26 28610 28939 + NULL(UNKNOWN)
[View Structural Homologs]
TC MGYG000001998_2 MGYG000001998_2_27 29302 31002 + 1.B.52.2.2
pfam MGYG000001998_2 MGYG000001998_2_28 31021 31419 + Acetyltransf_1 | Acetyltransf_7 | Acetyltransf_10
CAZyme MGYG000001998_2 MGYG000001998_2_29 31493 32623 + CE12
TF MGYG000001998_2 MGYG000001998_2_30 32646 33017 - Fe_dep_repress
pfam MGYG000001998_2 MGYG000001998_2_31 33169 33546 + Trns_repr_metal
TC MGYG000001998_2 MGYG000001998_2_32 33561 36110 + 3.A.3.5.15
Gene ID: MGYG000001998_2_19
Type: CAZyme
Location: 20463 - 22934 (+)
Gene ID: MGYG000001998_2_20
Type:
Location: 23134 - 24084 (+)
Gene ID: MGYG000001998_2_21
Type: STP
Location: 24145 - 24924 (+)
Gene ID: MGYG000001998_2_22
Type: CAZyme
Location: 25152 - 26462 (+)
Gene ID: MGYG000001998_2_23
Type: TC
Location: 26463 - 27131 (-)
Gene ID: MGYG000001998_2_24
Type: TC
Location: 27554 - 28015 (+)
Gene ID: MGYG000001998_2_25
Type: pfam
Location: 28117 - 28566 (+)
Gene ID: MGYG000001998_2_26
Type:
Location: 28610 - 28939 (+)
Gene ID: MGYG000001998_2_27
Type: TC
Location: 29302 - 31002 (+)
Gene ID: MGYG000001998_2_28
Type: pfam
Location: 31021 - 31419 (+)
Gene ID: MGYG000001998_2_29
Type: CAZyme
Location: 31493 - 32623 (+)
Gene ID: MGYG000001998_2_30
Type: TF
Location: 32646 - 33017 (-)
Gene ID: MGYG000001998_2_31
Type: pfam
Location: 33169 - 33546 (+)
Gene ID: MGYG000001998_2_32
Type: TC
Location: 33561 - 36110 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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