Cluster: MGYG000001998_CGC19
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000001998
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000001998_9 | MGYG000001998_9_26 | 27263 | 28174 | - | 2.A.4.7.2 |
| TF | MGYG000001998_9 | MGYG000001998_9_27 | 28251 | 29264 | - | LacI |
| pfam | MGYG000001998_9 | MGYG000001998_9_28 | 29551 | 30447 | + | IU_nuc_hydro | Sde182_NH-like |
| CAZyme | MGYG000001998_9 | MGYG000001998_9_29 | 30486 | 31607 | + | GH105 |
| TC | MGYG000001998_9 | MGYG000001998_9_30 | 31780 | 33171 | + | 2.A.50.2.1 |
Gene ID: MGYG000001998_9_26
Type: TC
Location: 27263 - 28174 (-)
Type: TC
Location: 27263 - 28174 (-)
Gene ID: MGYG000001998_9_27
Type: TF
Location: 28251 - 29264 (-)
Type: TF
Location: 28251 - 29264 (-)
Gene ID: MGYG000001998_9_28
Type: pfam
Location: 29551 - 30447 (+)
Type: pfam
Location: 29551 - 30447 (+)
Gene ID: MGYG000001998_9_29
Type: CAZyme
Location: 30486 - 31607 (+)
Type: CAZyme
Location: 30486 - 31607 (+)
Gene ID: MGYG000001998_9_30
Type: TC
Location: 31780 - 33171 (+)
Type: TC
Location: 31780 - 33171 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Species
Lachnospira sp900552795
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.