Cluster: MGYG000001998_CGC13
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000001998
- CGC Family ID: CGCFAM_01198
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000001998_5 | MGYG000001998_5_113 | 109586 | 110752 | + | 2.A.4.7.4 |
| sulfatase | MGYG000001998_5 | MGYG000001998_5_114 | 110833 | 111561 | - | S1_4 |
| pfam | MGYG000001998_5 | MGYG000001998_5_115 | 112316 | 112846 | + | Ribosomal_S30AE | Ribosom_S30AE_C |
| TC | MGYG000001998_5 | MGYG000001998_5_116 | 113063 | 115630 | + | 3.A.5.1.3 |
| pfam | MGYG000001998_5 | MGYG000001998_5_117 | 115655 | 116773 | + | RF-1 | PCRF |
| STP | MGYG000001998_5 | MGYG000001998_5_118 | 116823 | 117284 | + | CheW |
| CAZyme | MGYG000001998_5 | MGYG000001998_5_119 | 117285 | 118817 | + | GH77 |
Gene ID: MGYG000001998_5_113
Type: TC
Location: 109586 - 110752 (+)
Type: TC
Location: 109586 - 110752 (+)
Gene ID: MGYG000001998_5_114
Type: sulfatase
Location: 110833 - 111561 (-)
Type: sulfatase
Location: 110833 - 111561 (-)
Gene ID: MGYG000001998_5_115
Type: pfam
Location: 112316 - 112846 (+)
Type: pfam
Location: 112316 - 112846 (+)
Gene ID: MGYG000001998_5_116
Type: TC
Location: 113063 - 115630 (+)
Type: TC
Location: 113063 - 115630 (+)
Gene ID: MGYG000001998_5_117
Type: pfam
Location: 115655 - 116773 (+)
Type: pfam
Location: 115655 - 116773 (+)
Gene ID: MGYG000001998_5_118
Type: STP
Location: 116823 - 117284 (+)
Type: STP
Location: 116823 - 117284 (+)
Gene ID: MGYG000001998_5_119
Type: CAZyme
Location: 117285 - 118817 (+)
Type: CAZyme
Location: 117285 - 118817 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Species
Lachnospira sp900552795
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.