Cluster: MGYG000001998_CGC12
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000001998
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000001998_5 | MGYG000001998_5_100 | 97901 | 98785 | + | GH25 |
| pfam | MGYG000001998_5 | MGYG000001998_5_101 | 98885 | 99355 | - | Sod_Cu |
| TC | MGYG000001998_5 | MGYG000001998_5_102 | 99598 | 100239 | + | 9.B.31.1.1 |
| CAZyme | MGYG000001998_5 | MGYG000001998_5_103 | 100227 | 101333 | + | GT28 |
| pfam | MGYG000001998_5 | MGYG000001998_5_104 | 101356 | 102381 | + | DUF1266 | Imm33 |
| pfam | MGYG000001998_5 | MGYG000001998_5_105 | 102435 | 103121 | + | DNA_alkylation |
| TC | MGYG000001998_5 | MGYG000001998_5_106 | 103118 | 103675 | + | 2.A.107.1.2 |
Gene ID: MGYG000001998_5_100
Type: CAZyme
Location: 97901 - 98785 (+)
Type: CAZyme
Location: 97901 - 98785 (+)
Gene ID: MGYG000001998_5_101
Type: pfam
Location: 98885 - 99355 (-)
Type: pfam
Location: 98885 - 99355 (-)
Gene ID: MGYG000001998_5_102
Type: TC
Location: 99598 - 100239 (+)
Type: TC
Location: 99598 - 100239 (+)
Gene ID: MGYG000001998_5_103
Type: CAZyme
Location: 100227 - 101333 (+)
Type: CAZyme
Location: 100227 - 101333 (+)
Gene ID: MGYG000001998_5_104
Type: pfam
Location: 101356 - 102381 (+)
Type: pfam
Location: 101356 - 102381 (+)
Gene ID: MGYG000001998_5_105
Type: pfam
Location: 102435 - 103121 (+)
Type: pfam
Location: 102435 - 103121 (+)
Gene ID: MGYG000001998_5_106
Type: TC
Location: 103118 - 103675 (+)
Type: TC
Location: 103118 - 103675 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Species
Lachnospira sp900552795
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.