Cluster: MGYG000001998_CGC11
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000001998
- CGC Family ID: CGCFAM_00015
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000001998_5 | MGYG000001998_5_86 | 80830 | 82056 | + | GT4 |
| CAZyme | MGYG000001998_5 | MGYG000001998_5_87 | 82233 | 83156 | + | GT11 |
| pfam | MGYG000001998_5 | MGYG000001998_5_88 | 83206 | 84138 | + | Glycos_transf_2 |
| TC | MGYG000001998_5 | MGYG000001998_5_89 | 84212 | 85753 | + | 2.A.66.1.40 |
| pfam | MGYG000001998_5 | MGYG000001998_5_90 | 85820 | 86839 | + | EpsG |
| CAZyme | MGYG000001998_5 | MGYG000001998_5_91 | 86959 | 87882 | + | GT2 |
Gene ID: MGYG000001998_5_86
Type: CAZyme
Location: 80830 - 82056 (+)
Type: CAZyme
Location: 80830 - 82056 (+)
Gene ID: MGYG000001998_5_87
Type: CAZyme
Location: 82233 - 83156 (+)
Type: CAZyme
Location: 82233 - 83156 (+)
Gene ID: MGYG000001998_5_88
Type: pfam
Location: 83206 - 84138 (+)
Type: pfam
Location: 83206 - 84138 (+)
Gene ID: MGYG000001998_5_89
Type: TC
Location: 84212 - 85753 (+)
Type: TC
Location: 84212 - 85753 (+)
Gene ID: MGYG000001998_5_90
Type: pfam
Location: 85820 - 86839 (+)
Type: pfam
Location: 85820 - 86839 (+)
Gene ID: MGYG000001998_5_91
Type: CAZyme
Location: 86959 - 87882 (+)
Type: CAZyme
Location: 86959 - 87882 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Species
Lachnospira sp900552795
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.