Cluster: MGYG000001998_CGC10
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000001998
- CGC Family ID: CGCFAM_00905
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000001998_4 | MGYG000001998_4_61 | 69983 | 70453 | + | 9.A.11.1.1 |
| TC | MGYG000001998_4 | MGYG000001998_4_62 | 70447 | 71451 | + | 9.A.11.1.1 |
| pfam | MGYG000001998_4 | MGYG000001998_4_63 | 71453 | 71812 | + | SpoVAC_SpoVAEB |
| CAZyme | MGYG000001998_4 | MGYG000001998_4_64 | 71977 | 74652 | - | GT51 |
| pfam | MGYG000001998_4 | MGYG000001998_4_65 | 74808 | 75476 | + | UPF0029 | DUF1949 |
| NULL(UNKNOWN) | MGYG000001998_4 | MGYG000001998_4_66 | 75956 | 77569 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000001998_4 | MGYG000001998_4_67 | 77702 | 79165 | + | 3.A.1.1.29 |
| TC | MGYG000001998_4 | MGYG000001998_4_68 | 79178 | 80041 | + | 3.A.1.1.29 |
| CAZyme | MGYG000001998_4 | MGYG000001998_4_69 | 80263 | 82173 | + | CBM91 | GH43_12 |
| NULL(UNKNOWN) | MGYG000001998_4 | MGYG000001998_4_70 | 82267 | 83199 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000001998_4 | MGYG000001998_4_71 | 83190 | 84746 | + | GH28 |
| TC | MGYG000001998_4 | MGYG000001998_4_72 | 84756 | 86546 | + | 3.A.1.106.2 |
Gene ID: MGYG000001998_4_61
Type: TC
Location: 69983 - 70453 (+)
Type: TC
Location: 69983 - 70453 (+)
Gene ID: MGYG000001998_4_62
Type: TC
Location: 70447 - 71451 (+)
Type: TC
Location: 70447 - 71451 (+)
Gene ID: MGYG000001998_4_63
Type: pfam
Location: 71453 - 71812 (+)
Type: pfam
Location: 71453 - 71812 (+)
Gene ID: MGYG000001998_4_64
Type: CAZyme
Location: 71977 - 74652 (-)
Type: CAZyme
Location: 71977 - 74652 (-)
Gene ID: MGYG000001998_4_65
Type: pfam
Location: 74808 - 75476 (+)
Type: pfam
Location: 74808 - 75476 (+)
Gene ID: MGYG000001998_4_66
Type:
Location: 75956 - 77569 (+)
Type:
Location: 75956 - 77569 (+)
Gene ID: MGYG000001998_4_67
Type: TC
Location: 77702 - 79165 (+)
Type: TC
Location: 77702 - 79165 (+)
Gene ID: MGYG000001998_4_68
Type: TC
Location: 79178 - 80041 (+)
Type: TC
Location: 79178 - 80041 (+)
Gene ID: MGYG000001998_4_69
Type: CAZyme
Location: 80263 - 82173 (+)
Type: CAZyme
Location: 80263 - 82173 (+)
Gene ID: MGYG000001998_4_70
Type:
Location: 82267 - 83199 (+)
Type:
Location: 82267 - 83199 (+)
Gene ID: MGYG000001998_4_71
Type: CAZyme
Location: 83190 - 84746 (+)
Type: CAZyme
Location: 83190 - 84746 (+)
Gene ID: MGYG000001998_4_72
Type: TC
Location: 84756 - 86546 (+)
Type: TC
Location: 84756 - 86546 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Species
Lachnospira sp900552795
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.