Cluster: MGYG000001998_CGC1
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000001998
- CGC Family ID: CGCFAM_01526
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000001998_1 | MGYG000001998_1_148 | 163739 | 164521 | + | 8.A.3.2.3 |
| pfam | MGYG000001998_1 | MGYG000001998_1_149 | 164564 | 165289 | + | Bact_surface_Ig-like |
| peptidase | MGYG000001998_1 | MGYG000001998_1_150 | 165497 | 166441 | + | S33.UPW |
| CAZyme | MGYG000001998_1 | MGYG000001998_1_151 | 166576 | 168303 | + | GH25 |
| pfam | MGYG000001998_1 | MGYG000001998_1_152 | 168303 | 169625 | + | UPF0004 | Radical_SAM | TRAM_2 |
| TC | MGYG000001998_1 | MGYG000001998_1_153 | 169693 | 170241 | + | 4.F.1.1.7 |
Gene ID: MGYG000001998_1_148
Type: TC
Location: 163739 - 164521 (+)
Type: TC
Location: 163739 - 164521 (+)
Gene ID: MGYG000001998_1_149
Type: pfam
Location: 164564 - 165289 (+)
Type: pfam
Location: 164564 - 165289 (+)
Gene ID: MGYG000001998_1_150
Type: peptidase
Location: 165497 - 166441 (+)
Type: peptidase
Location: 165497 - 166441 (+)
Gene ID: MGYG000001998_1_151
Type: CAZyme
Location: 166576 - 168303 (+)
Type: CAZyme
Location: 166576 - 168303 (+)
Gene ID: MGYG000001998_1_152
Type: pfam
Location: 168303 - 169625 (+)
Type: pfam
Location: 168303 - 169625 (+)
Gene ID: MGYG000001998_1_153
Type: TC
Location: 169693 - 170241 (+)
Type: TC
Location: 169693 - 170241 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Species
Lachnospira sp900552795
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.