Cluster: MGYG000001996_CGC9
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000001996
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000001996_19 | MGYG000001996_19_3 | 2154 | 3554 | + | GH1 |
| TC | MGYG000001996_19 | MGYG000001996_19_4 | 3675 | 5027 | + | 4.A.3.2.2 |
| TC | MGYG000001996_19 | MGYG000001996_19_5 | 5181 | 5483 | + | 4.A.3.2.9 |
| TC | MGYG000001996_19 | MGYG000001996_19_6 | 5493 | 5825 | + | 4.A.3.2.3 |
| STP | MGYG000001996_19 | MGYG000001996_19_7 | 6067 | 7020 | + | Glucokinase |
| pfam | MGYG000001996_19 | MGYG000001996_19_8 | 7187 | 8110 | + | DHH | DHHA2 |
| TC | MGYG000001996_19 | MGYG000001996_19_9 | 8378 | 9736 | + | 2.A.33.1.1 |
Gene ID: MGYG000001996_19_3
Type: CAZyme
Location: 2154 - 3554 (+)
Type: CAZyme
Location: 2154 - 3554 (+)
Gene ID: MGYG000001996_19_4
Type: TC
Location: 3675 - 5027 (+)
Type: TC
Location: 3675 - 5027 (+)
Gene ID: MGYG000001996_19_5
Type: TC
Location: 5181 - 5483 (+)
Type: TC
Location: 5181 - 5483 (+)
Gene ID: MGYG000001996_19_6
Type: TC
Location: 5493 - 5825 (+)
Type: TC
Location: 5493 - 5825 (+)
Gene ID: MGYG000001996_19_7
Type: STP
Location: 6067 - 7020 (+)
Type: STP
Location: 6067 - 7020 (+)
Gene ID: MGYG000001996_19_8
Type: pfam
Location: 7187 - 8110 (+)
Type: pfam
Location: 7187 - 8110 (+)
Gene ID: MGYG000001996_19_9
Type: TC
Location: 8378 - 9736 (+)
Type: TC
Location: 8378 - 9736 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp905211615
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.