dbCAN Logo

Cluster: MGYG000001992_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000001992_3 MGYG000001992_3_5 4559 5728 - CE9
STP MGYG000001992_3 MGYG000001992_3_6 5846 7012 - SIS | SIS
TF MGYG000001992_3 MGYG000001992_3_7 7127 7858 - GntR
TC MGYG000001992_3 MGYG000001992_3_8 8043 9125 - 4.A.6.1.4
TC MGYG000001992_3 MGYG000001992_3_9 9115 9915 - 4.A.6.1.4
TC MGYG000001992_3 MGYG000001992_3_10 10006 10488 - 4.A.6.1.4
pfam MGYG000001992_3 MGYG000001992_3_11 10525 10806 - YajC
TC MGYG000001992_3 MGYG000001992_3_12 10806 11249 - 4.A.6.1.16
Gene ID: MGYG000001992_3_5
Type: CAZyme
Location: 4559 - 5728 (-)
Gene ID: MGYG000001992_3_6
Type: STP
Location: 5846 - 7012 (-)
Gene ID: MGYG000001992_3_7
Type: TF
Location: 7127 - 7858 (-)
Gene ID: MGYG000001992_3_8
Type: TC
Location: 8043 - 9125 (-)
Gene ID: MGYG000001992_3_9
Type: TC
Location: 9115 - 9915 (-)
Gene ID: MGYG000001992_3_10
Type: TC
Location: 10006 - 10488 (-)
Gene ID: MGYG000001992_3_11
Type: pfam
Location: 10525 - 10806 (-)
Gene ID: MGYG000001992_3_12
Type: TC
Location: 10806 - 11249 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000001992_3_11 vegan > omnivore 1.06455 0.00566

🧭 Explore Read Mapping of CGC

← Back to Cluster List