Cluster: MGYG000001985_CGC8
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000001985
- CGC Family ID: CGCFAM_00472
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000001985_11 | MGYG000001985_11_30 | 25113 | 27362 | + | CBM48 | GH13_9 |
| CAZyme | MGYG000001985_11 | MGYG000001985_11_31 | 27386 | 29464 | + | CBM48 | GH13_11 |
| CAZyme | MGYG000001985_11 | MGYG000001985_11_32 | 29479 | 31617 | + | GH77 |
| NULL(UNKNOWN) | MGYG000001985_11 | MGYG000001985_11_33 | 32594 | 32902 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | MGYG000001985_11 | MGYG000001985_11_34 | 32906 | 33853 | - | Zn_ribbon_4 | Zn_ribbon_5 |
| TC | MGYG000001985_11 | MGYG000001985_11_35 | 33922 | 34701 | + | 3.A.1.140.1 |
Gene ID: MGYG000001985_11_30
Type: CAZyme
Location: 25113 - 27362 (+)
Type: CAZyme
Location: 25113 - 27362 (+)
Gene ID: MGYG000001985_11_31
Type: CAZyme
Location: 27386 - 29464 (+)
Type: CAZyme
Location: 27386 - 29464 (+)
Gene ID: MGYG000001985_11_32
Type: CAZyme
Location: 29479 - 31617 (+)
Type: CAZyme
Location: 29479 - 31617 (+)
Gene ID: MGYG000001985_11_33
Type:
Location: 32594 - 32902 (+)
Type:
Location: 32594 - 32902 (+)
Gene ID: MGYG000001985_11_34
Type: pfam
Location: 32906 - 33853 (-)
Type: pfam
Location: 32906 - 33853 (-)
Gene ID: MGYG000001985_11_35
Type: TC
Location: 33922 - 34701 (+)
Type: TC
Location: 33922 - 34701 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
MGBC133411
Species
MGBC133411 sp900540425
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.