Cluster: MGYG000001985_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000001985
- CGC Family ID: CGCFAM_03888
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000001985_6 | MGYG000001985_6_25 | 25388 | 26146 | + | GH23 |
| pfam | MGYG000001985_6 | MGYG000001985_6_26 | 26170 | 27681 | + | Lactamase_B_2 |
| pfam | MGYG000001985_6 | MGYG000001985_6_27 | 27674 | 28405 | + | Acyl-ACP_TE | Acyl-ACP_TE_C |
| TC | MGYG000001985_6 | MGYG000001985_6_28 | 28496 | 29251 | + | 3.A.1.3.21 |
Gene ID: MGYG000001985_6_25
Type: CAZyme
Location: 25388 - 26146 (+)
Type: CAZyme
Location: 25388 - 26146 (+)
Gene ID: MGYG000001985_6_26
Type: pfam
Location: 26170 - 27681 (+)
Type: pfam
Location: 26170 - 27681 (+)
Gene ID: MGYG000001985_6_27
Type: pfam
Location: 27674 - 28405 (+)
Type: pfam
Location: 27674 - 28405 (+)
Gene ID: MGYG000001985_6_28
Type: TC
Location: 28496 - 29251 (+)
Type: TC
Location: 28496 - 29251 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
MGBC133411
Species
MGBC133411 sp900540425
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.