Cluster: MGYG000001985_CGC13
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000001985
- CGC Family ID: CGCFAM_00003
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000001985_20 | MGYG000001985_20_20 | 22352 | 22732 | + | 2.A.7.33.3 |
| pfam | MGYG000001985_20 | MGYG000001985_20_21 | 22729 | 23700 | + | 3Beta_HSD | Epimerase | RmlD_sub_bind | NAD_binding_4 | NAD_binding_10 | GDP_Man_Dehyd |
| STP | MGYG000001985_20 | MGYG000001985_20_22 | 23693 | 24610 | + | Pribosyltran |
| CAZyme | MGYG000001985_20 | MGYG000001985_20_23 | 24713 | 25777 | + | GT2 |
| TC | MGYG000001985_20 | MGYG000001985_20_24 | 25893 | 27656 | + | 3.A.1.106.1 |
Gene ID: MGYG000001985_20_20
Type: TC
Location: 22352 - 22732 (+)
Type: TC
Location: 22352 - 22732 (+)
Gene ID: MGYG000001985_20_21
Type: pfam
Location: 22729 - 23700 (+)
Type: pfam
Location: 22729 - 23700 (+)
Gene ID: MGYG000001985_20_22
Type: STP
Location: 23693 - 24610 (+)
Type: STP
Location: 23693 - 24610 (+)
Gene ID: MGYG000001985_20_23
Type: CAZyme
Location: 24713 - 25777 (+)
Type: CAZyme
Location: 24713 - 25777 (+)
Gene ID: MGYG000001985_20_24
Type: TC
Location: 25893 - 27656 (+)
Type: TC
Location: 25893 - 27656 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
MGBC133411
Species
MGBC133411 sp900540425
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.