Cluster: MGYG000001970_CGC5
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 9
- Substrate:
- Genome ID: MGYG000001970
- CGC Family ID: CGCFAM_00003
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000001970_2 | MGYG000001970_2_90 | 104388 | 106286 | + | 9.B.18.2.1 |
| TC | MGYG000001970_2 | MGYG000001970_2_91 | 106330 | 106929 | + | 9.B.18.1.3 |
| pfam | MGYG000001970_2 | MGYG000001970_2_92 | 106926 | 107762 | + | 3Beta_HSD | Epimerase | RmlD_sub_bind | NAD_binding_4 |
| CAZyme | MGYG000001970_2 | MGYG000001970_2_93 | 107750 | 108490 | + | GT2 |
| CAZyme | MGYG000001970_2 | MGYG000001970_2_94 | 108595 | 110283 | + | GT4 |
| CAZyme | MGYG000001970_2 | MGYG000001970_2_95 | 110295 | 111503 | + | GT4 |
| CAZyme | MGYG000001970_2 | MGYG000001970_2_96 | 111553 | 112809 | + | GT4 |
| NULL(UNKNOWN) | MGYG000001970_2 | MGYG000001970_2_97 | 112796 | 113230 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000001970_2 | MGYG000001970_2_98 | 113217 | 114293 | + | GT4 |
| NULL(UNKNOWN) | MGYG000001970_2 | MGYG000001970_2_99 | 114298 | 114747 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000001970_2 | MGYG000001970_2_100 | 114728 | 115492 | + | GT4 |
| CAZyme | MGYG000001970_2 | MGYG000001970_2_101 | 115509 | 116690 | + | GT4 |
| NULL(UNKNOWN) | MGYG000001970_2 | MGYG000001970_2_102 | 116733 | 117269 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000001970_2 | MGYG000001970_2_103 | 117330 | 118418 | + | GT4 |
| CAZyme | MGYG000001970_2 | MGYG000001970_2_104 | 118465 | 119628 | + | GT4 |
Gene ID: MGYG000001970_2_90
Type: TC
Location: 104388 - 106286 (+)
Type: TC
Location: 104388 - 106286 (+)
Gene ID: MGYG000001970_2_91
Type: TC
Location: 106330 - 106929 (+)
Type: TC
Location: 106330 - 106929 (+)
Gene ID: MGYG000001970_2_92
Type: pfam
Location: 106926 - 107762 (+)
Type: pfam
Location: 106926 - 107762 (+)
Gene ID: MGYG000001970_2_93
Type: CAZyme
Location: 107750 - 108490 (+)
Type: CAZyme
Location: 107750 - 108490 (+)
Gene ID: MGYG000001970_2_94
Type: CAZyme
Location: 108595 - 110283 (+)
Type: CAZyme
Location: 108595 - 110283 (+)
Gene ID: MGYG000001970_2_95
Type: CAZyme
Location: 110295 - 111503 (+)
Type: CAZyme
Location: 110295 - 111503 (+)
Gene ID: MGYG000001970_2_96
Type: CAZyme
Location: 111553 - 112809 (+)
Type: CAZyme
Location: 111553 - 112809 (+)
Gene ID: MGYG000001970_2_97
Type:
Location: 112796 - 113230 (+)
Type:
Location: 112796 - 113230 (+)
Gene ID: MGYG000001970_2_98
Type: CAZyme
Location: 113217 - 114293 (+)
Type: CAZyme
Location: 113217 - 114293 (+)
Gene ID: MGYG000001970_2_99
Type:
Location: 114298 - 114747 (+)
Type:
Location: 114298 - 114747 (+)
Gene ID: MGYG000001970_2_100
Type: CAZyme
Location: 114728 - 115492 (+)
Type: CAZyme
Location: 114728 - 115492 (+)
Gene ID: MGYG000001970_2_101
Type: CAZyme
Location: 115509 - 116690 (+)
Type: CAZyme
Location: 115509 - 116690 (+)
Gene ID: MGYG000001970_2_102
Type:
Location: 116733 - 117269 (+)
Type:
Location: 116733 - 117269 (+)
Gene ID: MGYG000001970_2_103
Type: CAZyme
Location: 117330 - 118418 (+)
Type: CAZyme
Location: 117330 - 118418 (+)
Gene ID: MGYG000001970_2_104
Type: CAZyme
Location: 118465 - 119628 (+)
Type: CAZyme
Location: 118465 - 119628 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UBA2882
Species
UBA2882 sp002362385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.