Cluster: MGYG000001970_CGC2
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000001970
- CGC Family ID: CGCFAM_00133
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000001970_1 | MGYG000001970_1_79 | 79051 | 80034 | + | 3.A.1.1.10 |
| TC | MGYG000001970_1 | MGYG000001970_1_80 | 80049 | 80993 | + | 3.A.1.1.29 |
| STP | MGYG000001970_1 | MGYG000001970_1_81 | 81020 | 82816 | + | SBP_bac_1 |
| TF | MGYG000001970_1 | MGYG000001970_1_82 | 82852 | 84411 | - | HTH_AraC | HTH_AraC |
| TC | MGYG000001970_1 | MGYG000001970_1_83 | 84426 | 86213 | - | 8.A.59.2.1 |
| CAZyme | MGYG000001970_1 | MGYG000001970_1_84 | 86482 | 88524 | + | GH42 |
| CAZyme | MGYG000001970_1 | MGYG000001970_1_85 | 88521 | 90869 | + | GH31_3 |
Gene ID: MGYG000001970_1_79
Type: TC
Location: 79051 - 80034 (+)
Type: TC
Location: 79051 - 80034 (+)
Gene ID: MGYG000001970_1_80
Type: TC
Location: 80049 - 80993 (+)
Type: TC
Location: 80049 - 80993 (+)
Gene ID: MGYG000001970_1_81
Type: STP
Location: 81020 - 82816 (+)
Type: STP
Location: 81020 - 82816 (+)
Gene ID: MGYG000001970_1_82
Type: TF
Location: 82852 - 84411 (-)
Type: TF
Location: 82852 - 84411 (-)
Gene ID: MGYG000001970_1_83
Type: TC
Location: 84426 - 86213 (-)
Type: TC
Location: 84426 - 86213 (-)
Gene ID: MGYG000001970_1_84
Type: CAZyme
Location: 86482 - 88524 (+)
Type: CAZyme
Location: 86482 - 88524 (+)
Gene ID: MGYG000001970_1_85
Type: CAZyme
Location: 88521 - 90869 (+)
Type: CAZyme
Location: 88521 - 90869 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UBA2882
Species
UBA2882 sp002362385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.