Cluster: MGYG000001970_CGC16
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000001970
- CGC Family ID: CGCFAM_00199
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000001970_22 | MGYG000001970_22_5 | 3032 | 5230 | - | GH36 |
| CAZyme | MGYG000001970_22 | MGYG000001970_22_6 | 5253 | 7052 | - | GH13_4 |
| TC | MGYG000001970_22 | MGYG000001970_22_7 | 7065 | 8075 | - | 3.A.1.1.28 |
| TC | MGYG000001970_22 | MGYG000001970_22_8 | 8075 | 8983 | - | 3.A.1.1.28 |
| TC | MGYG000001970_22 | MGYG000001970_22_9 | 8984 | 10273 | - | 3.A.1.1.28 |
| TF | MGYG000001970_22 | MGYG000001970_22_10 | 10568 | 11575 | - | LacI |
| CAZyme | MGYG000001970_22 | MGYG000001970_22_11 | 11625 | 13277 | - | GH13_31 |
Gene ID: MGYG000001970_22_5
Type: CAZyme
Location: 3032 - 5230 (-)
Type: CAZyme
Location: 3032 - 5230 (-)
Gene ID: MGYG000001970_22_6
Type: CAZyme
Location: 5253 - 7052 (-)
Type: CAZyme
Location: 5253 - 7052 (-)
Gene ID: MGYG000001970_22_7
Type: TC
Location: 7065 - 8075 (-)
Type: TC
Location: 7065 - 8075 (-)
Gene ID: MGYG000001970_22_8
Type: TC
Location: 8075 - 8983 (-)
Type: TC
Location: 8075 - 8983 (-)
Gene ID: MGYG000001970_22_9
Type: TC
Location: 8984 - 10273 (-)
Type: TC
Location: 8984 - 10273 (-)
Gene ID: MGYG000001970_22_10
Type: TF
Location: 10568 - 11575 (-)
Type: TF
Location: 10568 - 11575 (-)
Gene ID: MGYG000001970_22_11
Type: CAZyme
Location: 11625 - 13277 (-)
Type: CAZyme
Location: 11625 - 13277 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UBA2882
Species
UBA2882 sp002362385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.