Cluster: MGYG000001970_CGC12
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000001970
- CGC Family ID: CGCFAM_00114
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000001970_11 | MGYG000001970_11_11 | 12409 | 13170 | + | 3.A.1.16.4 |
| pfam | MGYG000001970_11 | MGYG000001970_11_12 | 13154 | 13942 | + | BPD_transp_1 |
| STP | MGYG000001970_11 | MGYG000001970_11_13 | 14041 | 15774 | - | GGDEF |
| TC | MGYG000001970_11 | MGYG000001970_11_14 | 15865 | 16974 | - | 8.A.59.4.2 |
| TC | MGYG000001970_11 | MGYG000001970_11_15 | 17211 | 18104 | - | 1.A.23.2.1 |
| CAZyme | MGYG000001970_11 | MGYG000001970_11_16 | 18101 | 20590 | - | CBM48 | GH13_9 |
Gene ID: MGYG000001970_11_11
Type: TC
Location: 12409 - 13170 (+)
Type: TC
Location: 12409 - 13170 (+)
Gene ID: MGYG000001970_11_12
Type: pfam
Location: 13154 - 13942 (+)
Type: pfam
Location: 13154 - 13942 (+)
Gene ID: MGYG000001970_11_13
Type: STP
Location: 14041 - 15774 (-)
Type: STP
Location: 14041 - 15774 (-)
Gene ID: MGYG000001970_11_14
Type: TC
Location: 15865 - 16974 (-)
Type: TC
Location: 15865 - 16974 (-)
Gene ID: MGYG000001970_11_15
Type: TC
Location: 17211 - 18104 (-)
Type: TC
Location: 17211 - 18104 (-)
Gene ID: MGYG000001970_11_16
Type: CAZyme
Location: 18101 - 20590 (-)
Type: CAZyme
Location: 18101 - 20590 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UBA2882
Species
UBA2882 sp002362385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.