Cluster: MGYG000001964_CGC40
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000001964
- CGC Family ID: CGCFAM_01690
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000001964_71 | MGYG000001964_71_1 | 175 | 1965 | + | 9.B.33.1.1 |
| TF | MGYG000001964_71 | MGYG000001964_71_2 | 1940 | 3463 | + | HTH_AraC |
| pfam | MGYG000001964_71 | MGYG000001964_71_3 | 3489 | 4349 | - | AP_endonuc_2 |
| CAZyme | MGYG000001964_71 | MGYG000001964_71_4 | 4363 | 5517 | - | GH177 |
Gene ID: MGYG000001964_71_1
Type: TC
Location: 175 - 1965 (+)
Type: TC
Location: 175 - 1965 (+)
Gene ID: MGYG000001964_71_2
Type: TF
Location: 1940 - 3463 (+)
Type: TF
Location: 1940 - 3463 (+)
Gene ID: MGYG000001964_71_3
Type: pfam
Location: 3489 - 4349 (-)
Type: pfam
Location: 3489 - 4349 (-)
Gene ID: MGYG000001964_71_4
Type: CAZyme
Location: 4363 - 5517 (-)
Type: CAZyme
Location: 4363 - 5517 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor sp900772845
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000001964_71_1 | vegan > omnivore | 1.05933 | 0.02349 |
| MGYG000001964_71_2 | vegetarian > omnivore | 1.09342 | 0.01560 |