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Cluster: MGYG000001964_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000001964_45 MGYG000001964_45_12 11445 13184 - GH154
CAZyme MGYG000001964_45 MGYG000001964_45_13 13473 14645 - GH88
TC MGYG000001964_45 MGYG000001964_45_14 14756 15595 - 3.A.1.1.11
pfam MGYG000001964_45 MGYG000001964_45_15 15609 16400 - DUF7402
TC MGYG000001964_45 MGYG000001964_45_16 16400 17299 - 3.A.1.1.20
STP MGYG000001964_45 MGYG000001964_45_17 17433 18797 - SBP_bac_1
TC MGYG000001964_45 MGYG000001964_45_18 19059 20879 + 8.A.59.2.1
TF MGYG000001964_45 MGYG000001964_45_19 20915 22513 + HTH_AraC | HTH_AraC
CAZyme MGYG000001964_45 MGYG000001964_45_20 22575 24512 + PL33_1
Gene ID: MGYG000001964_45_12
Type: CAZyme
Location: 11445 - 13184 (-)
Gene ID: MGYG000001964_45_13
Type: CAZyme
Location: 13473 - 14645 (-)
Gene ID: MGYG000001964_45_14
Type: TC
Location: 14756 - 15595 (-)
Gene ID: MGYG000001964_45_15
Type: pfam
Location: 15609 - 16400 (-)
Gene ID: MGYG000001964_45_16
Type: TC
Location: 16400 - 17299 (-)
Gene ID: MGYG000001964_45_17
Type: STP
Location: 17433 - 18797 (-)
Gene ID: MGYG000001964_45_18
Type: TC
Location: 19059 - 20879 (+)
Gene ID: MGYG000001964_45_19
Type: TF
Location: 20915 - 22513 (+)
Gene ID: MGYG000001964_45_20
Type: CAZyme
Location: 22575 - 24512 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000001964_45_14 vegan > omnivore 1.02250 0.03610

🧭 Explore Read Mapping of CGC

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