Cluster: MGYG000001964_CGC17
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 5
- Substrate:
- Genome ID: MGYG000001964
- CGC Family ID: CGCFAM_00224
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000001964_15 | MGYG000001964_15_27 | 25470 | 26381 | - | 9.B.70.1.1 |
| TC | MGYG000001964_15 | MGYG000001964_15_28 | 26611 | 27969 | + | 2.A.38.1.1 |
| TC | MGYG000001964_15 | MGYG000001964_15_29 | 27990 | 29435 | + | 2.A.38.1.1 |
| CAZyme | MGYG000001964_15 | MGYG000001964_15_30 | 29558 | 31666 | - | GH3 |
| TF | MGYG000001964_15 | MGYG000001964_15_31 | 31765 | 32640 | - | HTH_AraC |
| NULL(UNKNOWN) | MGYG000001964_15 | MGYG000001964_15_32 | 32579 | 32899 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000001964_15 | MGYG000001964_15_33 | 32944 | 34089 | - | GH8 |
| TC | MGYG000001964_15 | MGYG000001964_15_34 | 34108 | 35004 | - | 3.A.1.1.29 |
| TC | MGYG000001964_15 | MGYG000001964_15_35 | 35028 | 35984 | - | 3.A.1.1.29 |
| TC | MGYG000001964_15 | MGYG000001964_15_36 | 36060 | 37772 | - | 3.A.1.1.29 |
| TF | MGYG000001964_15 | MGYG000001964_15_37 | 37900 | 39495 | - | HTH_AraC | HTH_AraC |
| TC | MGYG000001964_15 | MGYG000001964_15_38 | 39470 | 41263 | - | 8.A.59.2.1 |
| CAZyme | MGYG000001964_15 | MGYG000001964_15_39 | 41359 | 42921 | - | CBM91 | GH43_12 |
| CAZyme | MGYG000001964_15 | MGYG000001964_15_40 | 42942 | 44678 | - | CE17 |
| CAZyme | MGYG000001964_15 | MGYG000001964_15_41 | 44771 | 46690 | - | CE1 |
Gene ID: MGYG000001964_15_27
Type: TC
Location: 25470 - 26381 (-)
Type: TC
Location: 25470 - 26381 (-)
Gene ID: MGYG000001964_15_28
Type: TC
Location: 26611 - 27969 (+)
Type: TC
Location: 26611 - 27969 (+)
Gene ID: MGYG000001964_15_29
Type: TC
Location: 27990 - 29435 (+)
Type: TC
Location: 27990 - 29435 (+)
Gene ID: MGYG000001964_15_30
Type: CAZyme
Location: 29558 - 31666 (-)
Type: CAZyme
Location: 29558 - 31666 (-)
Gene ID: MGYG000001964_15_31
Type: TF
Location: 31765 - 32640 (-)
Type: TF
Location: 31765 - 32640 (-)
Gene ID: MGYG000001964_15_32
Type:
Location: 32579 - 32899 (-)
Type:
Location: 32579 - 32899 (-)
Gene ID: MGYG000001964_15_33
Type: CAZyme
Location: 32944 - 34089 (-)
Type: CAZyme
Location: 32944 - 34089 (-)
Gene ID: MGYG000001964_15_34
Type: TC
Location: 34108 - 35004 (-)
Type: TC
Location: 34108 - 35004 (-)
Gene ID: MGYG000001964_15_35
Type: TC
Location: 35028 - 35984 (-)
Type: TC
Location: 35028 - 35984 (-)
Gene ID: MGYG000001964_15_36
Type: TC
Location: 36060 - 37772 (-)
Type: TC
Location: 36060 - 37772 (-)
Gene ID: MGYG000001964_15_37
Type: TF
Location: 37900 - 39495 (-)
Type: TF
Location: 37900 - 39495 (-)
Gene ID: MGYG000001964_15_38
Type: TC
Location: 39470 - 41263 (-)
Type: TC
Location: 39470 - 41263 (-)
Gene ID: MGYG000001964_15_39
Type: CAZyme
Location: 41359 - 42921 (-)
Type: CAZyme
Location: 41359 - 42921 (-)
Gene ID: MGYG000001964_15_40
Type: CAZyme
Location: 42942 - 44678 (-)
Type: CAZyme
Location: 42942 - 44678 (-)
Gene ID: MGYG000001964_15_41
Type: CAZyme
Location: 44771 - 46690 (-)
Type: CAZyme
Location: 44771 - 46690 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor sp900772845
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.