Cluster: MGYG000001964_CGC15
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 7
- Substrate:
- Genome ID: MGYG000001964
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000001964_12 | MGYG000001964_12_4 | 5137 | 6075 | - | GT2 |
| pfam | MGYG000001964_12 | MGYG000001964_12_5 | 6275 | 7405 | - | LytR_cpsA_psr |
| TC | MGYG000001964_12 | MGYG000001964_12_6 | 7423 | 8829 | - | 9.B.18.1.1 |
| CAZyme | MGYG000001964_12 | MGYG000001964_12_7 | 8932 | 9951 | - | GT2 |
| CAZyme | MGYG000001964_12 | MGYG000001964_12_8 | 9948 | 11375 | - | GT2 |
| pfam | MGYG000001964_12 | MGYG000001964_12_9 | 11546 | 13267 | - | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III |
| CAZyme | MGYG000001964_12 | MGYG000001964_12_10 | 13365 | 15434 | - | GT2 |
| CAZyme | MGYG000001964_12 | MGYG000001964_12_11 | 15486 | 17522 | - | GT2 |
| pfam | MGYG000001964_12 | MGYG000001964_12_12 | 17563 | 19635 | - | PCMT | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 |
| TC | MGYG000001964_12 | MGYG000001964_12_13 | 19639 | 20982 | - | 3.A.1.103.6 |
| pfam | MGYG000001964_12 | MGYG000001964_12_14 | 20989 | 22515 | - | DUF6056 |
| TC | MGYG000001964_12 | MGYG000001964_12_15 | 22598 | 23602 | - | 3.A.1.104.1 |
| pfam | MGYG000001964_12 | MGYG000001964_12_16 | 23577 | 24161 | - | dTDP_sugar_isom |
| CAZyme | MGYG000001964_12 | MGYG000001964_12_17 | 24216 | 25502 | - | GH25 |
| pfam | MGYG000001964_12 | MGYG000001964_12_18 | 25492 | 26361 | - | NTP_transferase | NTP_transf_3 |
| pfam | MGYG000001964_12 | MGYG000001964_12_19 | 26459 | 27544 | - | 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd |
| CAZyme | MGYG000001964_12 | MGYG000001964_12_20 | 27725 | 30505 | - | GH25 |
Gene ID: MGYG000001964_12_4
Type: CAZyme
Location: 5137 - 6075 (-)
Type: CAZyme
Location: 5137 - 6075 (-)
Gene ID: MGYG000001964_12_5
Type: pfam
Location: 6275 - 7405 (-)
Type: pfam
Location: 6275 - 7405 (-)
Gene ID: MGYG000001964_12_6
Type: TC
Location: 7423 - 8829 (-)
Type: TC
Location: 7423 - 8829 (-)
Gene ID: MGYG000001964_12_7
Type: CAZyme
Location: 8932 - 9951 (-)
Type: CAZyme
Location: 8932 - 9951 (-)
Gene ID: MGYG000001964_12_8
Type: CAZyme
Location: 9948 - 11375 (-)
Type: CAZyme
Location: 9948 - 11375 (-)
Gene ID: MGYG000001964_12_9
Type: pfam
Location: 11546 - 13267 (-)
Type: pfam
Location: 11546 - 13267 (-)
Gene ID: MGYG000001964_12_10
Type: CAZyme
Location: 13365 - 15434 (-)
Type: CAZyme
Location: 13365 - 15434 (-)
Gene ID: MGYG000001964_12_11
Type: CAZyme
Location: 15486 - 17522 (-)
Type: CAZyme
Location: 15486 - 17522 (-)
Gene ID: MGYG000001964_12_12
Type: pfam
Location: 17563 - 19635 (-)
Type: pfam
Location: 17563 - 19635 (-)
Gene ID: MGYG000001964_12_13
Type: TC
Location: 19639 - 20982 (-)
Type: TC
Location: 19639 - 20982 (-)
Gene ID: MGYG000001964_12_14
Type: pfam
Location: 20989 - 22515 (-)
Type: pfam
Location: 20989 - 22515 (-)
Gene ID: MGYG000001964_12_15
Type: TC
Location: 22598 - 23602 (-)
Type: TC
Location: 22598 - 23602 (-)
Gene ID: MGYG000001964_12_16
Type: pfam
Location: 23577 - 24161 (-)
Type: pfam
Location: 23577 - 24161 (-)
Gene ID: MGYG000001964_12_17
Type: CAZyme
Location: 24216 - 25502 (-)
Type: CAZyme
Location: 24216 - 25502 (-)
Gene ID: MGYG000001964_12_18
Type: pfam
Location: 25492 - 26361 (-)
Type: pfam
Location: 25492 - 26361 (-)
Gene ID: MGYG000001964_12_19
Type: pfam
Location: 26459 - 27544 (-)
Type: pfam
Location: 26459 - 27544 (-)
Gene ID: MGYG000001964_12_20
Type: CAZyme
Location: 27725 - 30505 (-)
Type: CAZyme
Location: 27725 - 30505 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor sp900772845
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.