Cluster: MGYG000001964_CGC13
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000001964
- CGC Family ID: CGCFAM_03549
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000001964_9 | MGYG000001964_9_6 | 4176 | 5681 | + | GH28 |
| pfam | MGYG000001964_9 | MGYG000001964_9_7 | 5867 | 7234 | + | MatE | MatE |
| CAZyme | MGYG000001964_9 | MGYG000001964_9_8 | 7333 | 9159 | + | GH2 |
| pfam | MGYG000001964_9 | MGYG000001964_9_9 | 9302 | 10183 | - | Aldose_epim |
| TC | MGYG000001964_9 | MGYG000001964_9_10 | 10270 | 11628 | - | 2.A.66.1.34 |
Gene ID: MGYG000001964_9_6
Type: CAZyme
Location: 4176 - 5681 (+)
Type: CAZyme
Location: 4176 - 5681 (+)
Gene ID: MGYG000001964_9_7
Type: pfam
Location: 5867 - 7234 (+)
Type: pfam
Location: 5867 - 7234 (+)
Gene ID: MGYG000001964_9_8
Type: CAZyme
Location: 7333 - 9159 (+)
Type: CAZyme
Location: 7333 - 9159 (+)
Gene ID: MGYG000001964_9_9
Type: pfam
Location: 9302 - 10183 (-)
Type: pfam
Location: 9302 - 10183 (-)
Gene ID: MGYG000001964_9_10
Type: TC
Location: 10270 - 11628 (-)
Type: TC
Location: 10270 - 11628 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor sp900772845
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000001964_9_6 | vegan > omnivore | 1.00941 | 0.04489 |