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Cluster: MGYG000001956_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000001956_2 MGYG000001956_2_28 22712 23419 + 1.C.82.1.1
pfam MGYG000001956_2 MGYG000001956_2_29 23679 24263 + Ribosomal_L10
pfam MGYG000001956_2 MGYG000001956_2_30 24304 24681 + Ribosomal_L12 | Ribosomal_L12_N
CAZyme MGYG000001956_2 MGYG000001956_2_31 24810 25889 + GT4
CAZyme MGYG000001956_2 MGYG000001956_2_32 25902 26888 + GT2
CAZyme MGYG000001956_2 MGYG000001956_2_33 26899 28005 + GT4
CAZyme MGYG000001956_2 MGYG000001956_2_34 28032 29048 + GT2
pfam MGYG000001956_2 MGYG000001956_2_35 29068 30246 + NTP_transf_5
TC MGYG000001956_2 MGYG000001956_2_36 30384 31490 + 3.A.1.2.3
TC MGYG000001956_2 MGYG000001956_2_37 31487 33007 + 3.A.1.2.3
TC MGYG000001956_2 MGYG000001956_2_38 33021 34106 + 3.A.1.2.3
Gene ID: MGYG000001956_2_28
Type: TC
Location: 22712 - 23419 (+)
Gene ID: MGYG000001956_2_29
Type: pfam
Location: 23679 - 24263 (+)
Gene ID: MGYG000001956_2_30
Type: pfam
Location: 24304 - 24681 (+)
Gene ID: MGYG000001956_2_31
Type: CAZyme
Location: 24810 - 25889 (+)
Gene ID: MGYG000001956_2_32
Type: CAZyme
Location: 25902 - 26888 (+)
Gene ID: MGYG000001956_2_33
Type: CAZyme
Location: 26899 - 28005 (+)
Gene ID: MGYG000001956_2_34
Type: CAZyme
Location: 28032 - 29048 (+)
Gene ID: MGYG000001956_2_35
Type: pfam
Location: 29068 - 30246 (+)
Gene ID: MGYG000001956_2_36
Type: TC
Location: 30384 - 31490 (+)
Gene ID: MGYG000001956_2_37
Type: TC
Location: 31487 - 33007 (+)
Gene ID: MGYG000001956_2_38
Type: TC
Location: 33021 - 34106 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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