Cluster: MGYG000001955_CGC13
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate: fructan
- Genome ID: MGYG000001955
- CGC Family ID: CGCFAM_00035
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000001955_60 | MGYG000001955_60_7 | 7642 | 8595 | + | 3.A.1.1.10 |
| TC | MGYG000001955_60 | MGYG000001955_60_8 | 8611 | 9519 | + | 3.A.1.1.29 |
| STP | MGYG000001955_60 | MGYG000001955_60_9 | 9533 | 11218 | + | SBP_bac_1 |
| CAZyme | MGYG000001955_60 | MGYG000001955_60_10 | 11256 | 12746 | + | GH32 |
| pfam | MGYG000001955_60 | MGYG000001955_60_11 | 12790 | 13386 | - | Metallophos | Metallophos_2 |
| TC | MGYG000001955_60 | MGYG000001955_60_12 | 13524 | 14204 | - | 3.A.1.1.26 |
Gene ID: MGYG000001955_60_7
Type: TC
Location: 7642 - 8595 (+)
Type: TC
Location: 7642 - 8595 (+)
Gene ID: MGYG000001955_60_8
Type: TC
Location: 8611 - 9519 (+)
Type: TC
Location: 8611 - 9519 (+)
Gene ID: MGYG000001955_60_9
Type: STP
Location: 9533 - 11218 (+)
Type: STP
Location: 9533 - 11218 (+)
Gene ID: MGYG000001955_60_10
Type: CAZyme
Location: 11256 - 12746 (+)
Type: CAZyme
Location: 11256 - 12746 (+)
Gene ID: MGYG000001955_60_11
Type: pfam
Location: 12790 - 13386 (-)
Type: pfam
Location: 12790 - 13386 (-)
Gene ID: MGYG000001955_60_12
Type: TC
Location: 13524 - 14204 (-)
Type: TC
Location: 13524 - 14204 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Frisingicoccus
Species
Frisingicoccus sp900549105
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.