Cluster: MGYG000001955_CGC11
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate: galactan
- Genome ID: MGYG000001955
- CGC Family ID: CGCFAM_00938
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000001955_39 | MGYG000001955_39_14 | 13992 | 15830 | - | GH13_4 |
| TC | MGYG000001955_39 | MGYG000001955_39_15 | 15902 | 16999 | - | 3.A.1.1.26 |
| pfam | MGYG000001955_39 | MGYG000001955_39_16 | 17030 | 18538 | - | GalP_UDP_transf | GalP_UDP_tr_C |
| pfam | MGYG000001955_39 | MGYG000001955_39_17 | 18573 | 19742 | - | GHMP_kinases_N | GHMP_kinases_C | GalKase_gal_bdg |
| CAZyme | MGYG000001955_39 | MGYG000001955_39_18 | 19745 | 21370 | - | GH13_31 |
Gene ID: MGYG000001955_39_14
Type: CAZyme
Location: 13992 - 15830 (-)
Type: CAZyme
Location: 13992 - 15830 (-)
Gene ID: MGYG000001955_39_15
Type: TC
Location: 15902 - 16999 (-)
Type: TC
Location: 15902 - 16999 (-)
Gene ID: MGYG000001955_39_16
Type: pfam
Location: 17030 - 18538 (-)
Type: pfam
Location: 17030 - 18538 (-)
Gene ID: MGYG000001955_39_17
Type: pfam
Location: 18573 - 19742 (-)
Type: pfam
Location: 18573 - 19742 (-)
Gene ID: MGYG000001955_39_18
Type: CAZyme
Location: 19745 - 21370 (-)
Type: CAZyme
Location: 19745 - 21370 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Frisingicoccus
Species
Frisingicoccus sp900549105
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.