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Cluster: MGYG000001955_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000001955_3 MGYG000001955_3_5 3030 4460 - GT2
CAZyme MGYG000001955_3 MGYG000001955_3_6 4657 7152 - GT2 | GT2
NULL(UNKNOWN) MGYG000001955_3 MGYG000001955_3_7 7145 8461 - NULL(UNKNOWN)
[View Structural Homologs]
pfam MGYG000001955_3 MGYG000001955_3_8 8506 9426 - RrnaAD | Methyltransf_11 | Methyltransf_12 | Methyltransf_25 | Methyltransf_31
TC MGYG000001955_3 MGYG000001955_3_9 9441 10715 - 3.A.1.103.6
TC MGYG000001955_3 MGYG000001955_3_10 10737 12104 - 3.A.1.104.1
CAZyme MGYG000001955_3 MGYG000001955_3_11 12127 13068 - GT2
CAZyme MGYG000001955_3 MGYG000001955_3_12 13073 13834 - GT2
TC MGYG000001955_3 MGYG000001955_3_13 13860 15236 - 9.B.18.1.3
Gene ID: MGYG000001955_3_5
Type: CAZyme
Location: 3030 - 4460 (-)
Gene ID: MGYG000001955_3_6
Type: CAZyme
Location: 4657 - 7152 (-)
Gene ID: MGYG000001955_3_7
Type:
Location: 7145 - 8461 (-)
Gene ID: MGYG000001955_3_8
Type: pfam
Location: 8506 - 9426 (-)
Gene ID: MGYG000001955_3_9
Type: TC
Location: 9441 - 10715 (-)
Gene ID: MGYG000001955_3_10
Type: TC
Location: 10737 - 12104 (-)
Gene ID: MGYG000001955_3_11
Type: CAZyme
Location: 12127 - 13068 (-)
Gene ID: MGYG000001955_3_12
Type: CAZyme
Location: 13073 - 13834 (-)
Gene ID: MGYG000001955_3_13
Type: TC
Location: 13860 - 15236 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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