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Cluster: MGYG000001954_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000001954_76 MGYG000001954_76_3 2389 3495 + 3.A.1.20.1
TC MGYG000001954_76 MGYG000001954_76_4 3590 4738 + 3.A.1.20.1
TC MGYG000001954_76 MGYG000001954_76_5 4735 6399 + 3.A.1.20.1
TC MGYG000001954_76 MGYG000001954_76_6 6495 8246 + 9.B.33.1.1
TF MGYG000001954_76 MGYG000001954_76_7 8239 9015 + HTH_AraC
pfam MGYG000001954_76 MGYG000001954_76_8 9141 10493 + Choline_bind_1 | Choline_bind_1 | Choline_bind_1 | Choline_bind_2 | Choline_bind_3 | Choline_bind_3
CAZyme MGYG000001954_76 MGYG000001954_76_9 10506 11459 + GH25
Gene ID: MGYG000001954_76_3
Type: TC
Location: 2389 - 3495 (+)
Gene ID: MGYG000001954_76_4
Type: TC
Location: 3590 - 4738 (+)
Gene ID: MGYG000001954_76_5
Type: TC
Location: 4735 - 6399 (+)
Gene ID: MGYG000001954_76_6
Type: TC
Location: 6495 - 8246 (+)
Gene ID: MGYG000001954_76_7
Type: TF
Location: 8239 - 9015 (+)
Gene ID: MGYG000001954_76_8
Type: pfam
Location: 9141 - 10493 (+)
Gene ID: MGYG000001954_76_9
Type: CAZyme
Location: 10506 - 11459 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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