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Cluster: MGYG000001954_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000001954_1 MGYG000001954_1_46 53882 55675 + 9.B.33.1.1
pfam MGYG000001954_1 MGYG000001954_1_47 55672 56643 + Peripla_BP_4
TC MGYG000001954_1 MGYG000001954_1_48 56658 57677 + 3.A.1.2.3
pfam MGYG000001954_1 MGYG000001954_1_49 57834 59177 + Peripla_BP_4 | Peripla_BP_7
TC MGYG000001954_1 MGYG000001954_1_50 59277 60785 + 3.A.1.2.3
TC MGYG000001954_1 MGYG000001954_1_51 60801 62447 + 3.A.1.2.3
pfam MGYG000001954_1 MGYG000001954_1_52 62676 63119 + NUMOD1 | NUMOD1
CAZyme MGYG000001954_1 MGYG000001954_1_53 63175 64317 + GH18
Gene ID: MGYG000001954_1_46
Type: TC
Location: 53882 - 55675 (+)
Gene ID: MGYG000001954_1_47
Type: pfam
Location: 55672 - 56643 (+)
Gene ID: MGYG000001954_1_48
Type: TC
Location: 56658 - 57677 (+)
Gene ID: MGYG000001954_1_49
Type: pfam
Location: 57834 - 59177 (+)
Gene ID: MGYG000001954_1_50
Type: TC
Location: 59277 - 60785 (+)
Gene ID: MGYG000001954_1_51
Type: TC
Location: 60801 - 62447 (+)
Gene ID: MGYG000001954_1_52
Type: pfam
Location: 62676 - 63119 (+)
Gene ID: MGYG000001954_1_53
Type: CAZyme
Location: 63175 - 64317 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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