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Cluster: MGYG000001935_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000001935_4 MGYG000001935_4_11 9915 10358 + 4.A.6.1.16
pfam MGYG000001935_4 MGYG000001935_4_12 10358 10639 + YajC
TC MGYG000001935_4 MGYG000001935_4_13 10676 11158 + 4.A.6.1.4
TC MGYG000001935_4 MGYG000001935_4_14 11249 12049 + 4.A.6.1.4
TC MGYG000001935_4 MGYG000001935_4_15 12039 13121 + 4.A.6.1.4
TF MGYG000001935_4 MGYG000001935_4_16 13307 14038 + GntR
STP MGYG000001935_4 MGYG000001935_4_17 14153 15319 + SIS | SIS
CAZyme MGYG000001935_4 MGYG000001935_4_18 15437 16606 + CE9
Gene ID: MGYG000001935_4_11
Type: TC
Location: 9915 - 10358 (+)
Gene ID: MGYG000001935_4_12
Type: pfam
Location: 10358 - 10639 (+)
Gene ID: MGYG000001935_4_13
Type: TC
Location: 10676 - 11158 (+)
Gene ID: MGYG000001935_4_14
Type: TC
Location: 11249 - 12049 (+)
Gene ID: MGYG000001935_4_15
Type: TC
Location: 12039 - 13121 (+)
Gene ID: MGYG000001935_4_16
Type: TF
Location: 13307 - 14038 (+)
Gene ID: MGYG000001935_4_17
Type: STP
Location: 14153 - 15319 (+)
Gene ID: MGYG000001935_4_18
Type: CAZyme
Location: 15437 - 16606 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000001935_4_12 vegan > omnivore 1.00139 0.01287

🧭 Explore Read Mapping of CGC

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