Cluster: MGYG000001931_CGC7
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 7
- Substrate:
- Genome ID: MGYG000001931
- CGC Family ID: CGCFAM_08082
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000001931_9 | MGYG000001931_9_6 | 5428 | 6390 | + | GT2 |
| CAZyme | MGYG000001931_9 | MGYG000001931_9_7 | 6396 | 7580 | + | GT4 |
| CAZyme | MGYG000001931_9 | MGYG000001931_9_8 | 7583 | 8647 | + | GT4 |
| pfam | MGYG000001931_9 | MGYG000001931_9_9 | 8647 | 9807 | + | EpsG |
| CAZyme | MGYG000001931_9 | MGYG000001931_9_10 | 9813 | 10643 | + | CE4 |
| CAZyme | MGYG000001931_9 | MGYG000001931_9_11 | 10655 | 11707 | + | GT4 |
| pfam | MGYG000001931_9 | MGYG000001931_9_12 | 11898 | 12401 | + | Hexapep |
| NULL(UNKNOWN) | MGYG000001931_9 | MGYG000001931_9_13 | 12391 | 13602 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000001931_9 | MGYG000001931_9_14 | 13584 | 14288 | + | GT26 |
| pfam | MGYG000001931_9 | MGYG000001931_9_15 | 14349 | 15146 | + | Poly_export | SLBB | SLBB_2 |
| TC | MGYG000001931_9 | MGYG000001931_9_16 | 15175 | 17529 | + | 8.A.3.2.3 |
| CAZyme | MGYG000001931_9 | MGYG000001931_9_17 | 17620 | 19188 | - | GH144 |
Gene ID: MGYG000001931_9_6
Type: CAZyme
Location: 5428 - 6390 (+)
Type: CAZyme
Location: 5428 - 6390 (+)
Gene ID: MGYG000001931_9_7
Type: CAZyme
Location: 6396 - 7580 (+)
Type: CAZyme
Location: 6396 - 7580 (+)
Gene ID: MGYG000001931_9_8
Type: CAZyme
Location: 7583 - 8647 (+)
Type: CAZyme
Location: 7583 - 8647 (+)
Gene ID: MGYG000001931_9_9
Type: pfam
Location: 8647 - 9807 (+)
Type: pfam
Location: 8647 - 9807 (+)
Gene ID: MGYG000001931_9_10
Type: CAZyme
Location: 9813 - 10643 (+)
Type: CAZyme
Location: 9813 - 10643 (+)
Gene ID: MGYG000001931_9_11
Type: CAZyme
Location: 10655 - 11707 (+)
Type: CAZyme
Location: 10655 - 11707 (+)
Gene ID: MGYG000001931_9_12
Type: pfam
Location: 11898 - 12401 (+)
Type: pfam
Location: 11898 - 12401 (+)
Gene ID: MGYG000001931_9_13
Type:
Location: 12391 - 13602 (+)
Type:
Location: 12391 - 13602 (+)
Gene ID: MGYG000001931_9_14
Type: CAZyme
Location: 13584 - 14288 (+)
Type: CAZyme
Location: 13584 - 14288 (+)
Gene ID: MGYG000001931_9_15
Type: pfam
Location: 14349 - 15146 (+)
Type: pfam
Location: 14349 - 15146 (+)
Gene ID: MGYG000001931_9_16
Type: TC
Location: 15175 - 17529 (+)
Type: TC
Location: 15175 - 17529 (+)
Gene ID: MGYG000001931_9_17
Type: CAZyme
Location: 17620 - 19188 (-)
Type: CAZyme
Location: 17620 - 19188 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Limisoma
Species
Limisoma sp900548875
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.