Cluster: MGYG000001925_CGC8
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 6
- Substrate:
- Genome ID: MGYG000001925
- CGC Family ID: CGCFAM_00489
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000001925_4 | MGYG000001925_4_40 | 41723 | 43159 | + | 2.A.66.2.6 |
| CAZyme | MGYG000001925_4 | MGYG000001925_4_41 | 43159 | 44106 | + | GT8 |
| pfam | MGYG000001925_4 | MGYG000001925_4_42 | 44529 | 45725 | + | EpsG |
| CAZyme | MGYG000001925_4 | MGYG000001925_4_43 | 45736 | 46638 | + | GT2 |
| pfam | MGYG000001925_4 | MGYG000001925_4_44 | 46705 | 47286 | + | Hexapep |
| CAZyme | MGYG000001925_4 | MGYG000001925_4_45 | 47423 | 48499 | + | GT4 |
| CAZyme | MGYG000001925_4 | MGYG000001925_4_46 | 48670 | 49764 | + | GT4 |
| NULL(UNKNOWN) | MGYG000001925_4 | MGYG000001925_4_47 | 49872 | 50150 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000001925_4 | MGYG000001925_4_48 | 50184 | 50936 | + | GT26 |
| CAZyme | MGYG000001925_4 | MGYG000001925_4_49 | 50987 | 52063 | + | GT4 |
Gene ID: MGYG000001925_4_40
Type: TC
Location: 41723 - 43159 (+)
Type: TC
Location: 41723 - 43159 (+)
Gene ID: MGYG000001925_4_41
Type: CAZyme
Location: 43159 - 44106 (+)
Type: CAZyme
Location: 43159 - 44106 (+)
Gene ID: MGYG000001925_4_42
Type: pfam
Location: 44529 - 45725 (+)
Type: pfam
Location: 44529 - 45725 (+)
Gene ID: MGYG000001925_4_43
Type: CAZyme
Location: 45736 - 46638 (+)
Type: CAZyme
Location: 45736 - 46638 (+)
Gene ID: MGYG000001925_4_44
Type: pfam
Location: 46705 - 47286 (+)
Type: pfam
Location: 46705 - 47286 (+)
Gene ID: MGYG000001925_4_45
Type: CAZyme
Location: 47423 - 48499 (+)
Type: CAZyme
Location: 47423 - 48499 (+)
Gene ID: MGYG000001925_4_46
Type: CAZyme
Location: 48670 - 49764 (+)
Type: CAZyme
Location: 48670 - 49764 (+)
Gene ID: MGYG000001925_4_47
Type:
Location: 49872 - 50150 (-)
Type:
Location: 49872 - 50150 (-)
Gene ID: MGYG000001925_4_48
Type: CAZyme
Location: 50184 - 50936 (+)
Type: CAZyme
Location: 50184 - 50936 (+)
Gene ID: MGYG000001925_4_49
Type: CAZyme
Location: 50987 - 52063 (+)
Type: CAZyme
Location: 50987 - 52063 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola sp900544675
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.