Cluster: MGYG000001925_CGC5
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000001925
- CGC Family ID: CGCFAM_00048
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000001925_1 | MGYG000001925_1_104 | 143483 | 145426 | + | 3.A.1.120.6 |
| peptidase | MGYG000001925_1 | MGYG000001925_1_105 | 145573 | 147612 | + | M13.017 |
| pfam | MGYG000001925_1 | MGYG000001925_1_106 | 147774 | 150392 | - | tRNA-synt_2c | DHHA1 | tRNA_SAD |
| TC | MGYG000001925_1 | MGYG000001925_1_107 | 150528 | 151496 | + | 1.A.34.1.3 |
| TF | MGYG000001925_1 | MGYG000001925_1_108 | 151526 | 151873 | + | MerR |
| STP | MGYG000001925_1 | MGYG000001925_1_109 | 152380 | 154653 | - | HD |
| CAZyme | MGYG000001925_1 | MGYG000001925_1_110 | 154737 | 155975 | - | GH23 |
| pfam | MGYG000001925_1 | MGYG000001925_1_111 | 155979 | 156776 | - | DUF5683 |
| pfam | MGYG000001925_1 | MGYG000001925_1_112 | 156790 | 157689 | - | ParBc | HTH_ParB | ParB_dimer |
| TC | MGYG000001925_1 | MGYG000001925_1_113 | 157723 | 158484 | - | 8.A.3.2.3 |
| pfam | MGYG000001925_1 | MGYG000001925_1_114 | 158900 | 159673 | + | SurE |
| CAZyme | MGYG000001925_1 | MGYG000001925_1_115 | 159670 | 160821 | + | GT19 |
| pfam | MGYG000001925_1 | MGYG000001925_1_116 | 160810 | 161649 | - | CTP_transf_1 |
| TC | MGYG000001925_1 | MGYG000001925_1_117 | 161704 | 163773 | - | 3.A.16.1.1 |
Gene ID: MGYG000001925_1_104
Type: TC
Location: 143483 - 145426 (+)
Type: TC
Location: 143483 - 145426 (+)
Gene ID: MGYG000001925_1_105
Type: peptidase
Location: 145573 - 147612 (+)
Type: peptidase
Location: 145573 - 147612 (+)
Gene ID: MGYG000001925_1_106
Type: pfam
Location: 147774 - 150392 (-)
Type: pfam
Location: 147774 - 150392 (-)
Gene ID: MGYG000001925_1_107
Type: TC
Location: 150528 - 151496 (+)
Type: TC
Location: 150528 - 151496 (+)
Gene ID: MGYG000001925_1_108
Type: TF
Location: 151526 - 151873 (+)
Type: TF
Location: 151526 - 151873 (+)
Gene ID: MGYG000001925_1_109
Type: STP
Location: 152380 - 154653 (-)
Type: STP
Location: 152380 - 154653 (-)
Gene ID: MGYG000001925_1_110
Type: CAZyme
Location: 154737 - 155975 (-)
Type: CAZyme
Location: 154737 - 155975 (-)
Gene ID: MGYG000001925_1_111
Type: pfam
Location: 155979 - 156776 (-)
Type: pfam
Location: 155979 - 156776 (-)
Gene ID: MGYG000001925_1_112
Type: pfam
Location: 156790 - 157689 (-)
Type: pfam
Location: 156790 - 157689 (-)
Gene ID: MGYG000001925_1_113
Type: TC
Location: 157723 - 158484 (-)
Type: TC
Location: 157723 - 158484 (-)
Gene ID: MGYG000001925_1_114
Type: pfam
Location: 158900 - 159673 (+)
Type: pfam
Location: 158900 - 159673 (+)
Gene ID: MGYG000001925_1_115
Type: CAZyme
Location: 159670 - 160821 (+)
Type: CAZyme
Location: 159670 - 160821 (+)
Gene ID: MGYG000001925_1_116
Type: pfam
Location: 160810 - 161649 (-)
Type: pfam
Location: 160810 - 161649 (-)
Gene ID: MGYG000001925_1_117
Type: TC
Location: 161704 - 163773 (-)
Type: TC
Location: 161704 - 163773 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola sp900544675
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000001925_1_117 | vegetarian > vegan | 1.05140 | 0.01882 |