Cluster: MGYG000001925_CGC3
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000001925
- CGC Family ID: CGCFAM_04742
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000001925_1 | MGYG000001925_1_61 | 65083 | 65433 | + | 1.E.14.1.13 |
| TC | MGYG000001925_1 | MGYG000001925_1_62 | 65414 | 66109 | + | 2.A.122.1.1 |
| peptidase | MGYG000001925_1 | MGYG000001925_1_63 | 66230 | 68476 | - | S09.UPB |
| CAZyme | MGYG000001925_1 | MGYG000001925_1_64 | 68670 | 71075 | - | GH127 |
| CAZyme | MGYG000001925_1 | MGYG000001925_1_65 | 71112 | 73526 | - | CBM32 | GH43_34 |
| CAZyme | MGYG000001925_1 | MGYG000001925_1_66 | 73540 | 76263 | - | GH97 |
| pfam | MGYG000001925_1 | MGYG000001925_1_67 | 76434 | 77819 | - | DUF6055 |
| pfam | MGYG000001925_1 | MGYG000001925_1_68 | 77908 | 79653 | - | SusD_RagB | SusD-like_3 |
| TC | MGYG000001925_1 | MGYG000001925_1_69 | 79666 | 82842 | - | 1.B.14.6.1 |
Gene ID: MGYG000001925_1_61
Type: TC
Location: 65083 - 65433 (+)
Type: TC
Location: 65083 - 65433 (+)
Gene ID: MGYG000001925_1_62
Type: TC
Location: 65414 - 66109 (+)
Type: TC
Location: 65414 - 66109 (+)
Gene ID: MGYG000001925_1_63
Type: peptidase
Location: 66230 - 68476 (-)
Type: peptidase
Location: 66230 - 68476 (-)
Gene ID: MGYG000001925_1_64
Type: CAZyme
Location: 68670 - 71075 (-)
Type: CAZyme
Location: 68670 - 71075 (-)
Gene ID: MGYG000001925_1_65
Type: CAZyme
Location: 71112 - 73526 (-)
Type: CAZyme
Location: 71112 - 73526 (-)
Gene ID: MGYG000001925_1_66
Type: CAZyme
Location: 73540 - 76263 (-)
Type: CAZyme
Location: 73540 - 76263 (-)
Gene ID: MGYG000001925_1_67
Type: pfam
Location: 76434 - 77819 (-)
Type: pfam
Location: 76434 - 77819 (-)
Gene ID: MGYG000001925_1_68
Type: pfam
Location: 77908 - 79653 (-)
Type: pfam
Location: 77908 - 79653 (-)
Gene ID: MGYG000001925_1_69
Type: TC
Location: 79666 - 82842 (-)
Type: TC
Location: 79666 - 82842 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola sp900544675
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.