Cluster: MGYG000001925_CGC29
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 4
- Substrate:
- Genome ID: MGYG000001925
- CGC Family ID: CGCFAM_01077
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000001925_18 | MGYG000001925_18_3 | 1317 | 4406 | + | GH2 |
| pfam | MGYG000001925_18 | MGYG000001925_18_4 | 4504 | 5808 | - | Virul_fac_BrkB |
| TC | MGYG000001925_18 | MGYG000001925_18_5 | 6663 | 8159 | + | 9.B.160.1.10 |
| CAZyme | MGYG000001925_18 | MGYG000001925_18_6 | 8331 | 9797 | - | GH30_3 |
| pfam | MGYG000001925_18 | MGYG000001925_18_7 | 9807 | 11405 | - | SusD_RagB | SusD-like_3 |
| TC | MGYG000001925_18 | MGYG000001925_18_8 | 11427 | 14612 | - | 1.B.14.6.1 |
| CAZyme | MGYG000001925_18 | MGYG000001925_18_9 | 14918 | 17260 | - | GH88 | PL38 |
| CAZyme | MGYG000001925_18 | MGYG000001925_18_10 | 17305 | 19965 | - | CBM57 | GH2 |
| NULL(UNKNOWN) | MGYG000001925_18 | MGYG000001925_18_11 | 20094 | 20642 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | MGYG000001925_18 | MGYG000001925_18_12 | 20666 | 22345 | - | SusD_RagB | SusD-like_3 |
| TC | MGYG000001925_18 | MGYG000001925_18_13 | 22359 | 25466 | - | 1.B.14.6.1 |
Gene ID: MGYG000001925_18_3
Type: CAZyme
Location: 1317 - 4406 (+)
Type: CAZyme
Location: 1317 - 4406 (+)
Gene ID: MGYG000001925_18_4
Type: pfam
Location: 4504 - 5808 (-)
Type: pfam
Location: 4504 - 5808 (-)
Gene ID: MGYG000001925_18_5
Type: TC
Location: 6663 - 8159 (+)
Type: TC
Location: 6663 - 8159 (+)
Gene ID: MGYG000001925_18_6
Type: CAZyme
Location: 8331 - 9797 (-)
Type: CAZyme
Location: 8331 - 9797 (-)
Gene ID: MGYG000001925_18_7
Type: pfam
Location: 9807 - 11405 (-)
Type: pfam
Location: 9807 - 11405 (-)
Gene ID: MGYG000001925_18_8
Type: TC
Location: 11427 - 14612 (-)
Type: TC
Location: 11427 - 14612 (-)
Gene ID: MGYG000001925_18_9
Type: CAZyme
Location: 14918 - 17260 (-)
Type: CAZyme
Location: 14918 - 17260 (-)
Gene ID: MGYG000001925_18_10
Type: CAZyme
Location: 17305 - 19965 (-)
Type: CAZyme
Location: 17305 - 19965 (-)
Gene ID: MGYG000001925_18_11
Type:
Location: 20094 - 20642 (-)
Type:
Location: 20094 - 20642 (-)
Gene ID: MGYG000001925_18_12
Type: pfam
Location: 20666 - 22345 (-)
Type: pfam
Location: 20666 - 22345 (-)
Gene ID: MGYG000001925_18_13
Type: TC
Location: 22359 - 25466 (-)
Type: TC
Location: 22359 - 25466 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola sp900544675
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.