Cluster: MGYG000001925_CGC13
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 4
- Substrate:
- Genome ID: MGYG000001925
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000001925_8 | MGYG000001925_8_17 | 20818 | 22332 | + | GH30_2 |
| CAZyme | MGYG000001925_8 | MGYG000001925_8_18 | 22544 | 25045 | + | GH51_2 |
| CAZyme | MGYG000001925_8 | MGYG000001925_8_19 | 25050 | 26333 | + | PL42 |
| CAZyme | MGYG000001925_8 | MGYG000001925_8_20 | 26395 | 28707 | + | GH105 | GH154 |
| pfam | MGYG000001925_8 | MGYG000001925_8_21 | 28937 | 29938 | - | Ldh_1_N | Ldh_1_C |
| TC | MGYG000001925_8 | MGYG000001925_8_22 | 30371 | 32587 | + | 2.A.37.1.5 |
Gene ID: MGYG000001925_8_17
Type: CAZyme
Location: 20818 - 22332 (+)
Type: CAZyme
Location: 20818 - 22332 (+)
Gene ID: MGYG000001925_8_18
Type: CAZyme
Location: 22544 - 25045 (+)
Type: CAZyme
Location: 22544 - 25045 (+)
Gene ID: MGYG000001925_8_19
Type: CAZyme
Location: 25050 - 26333 (+)
Type: CAZyme
Location: 25050 - 26333 (+)
Gene ID: MGYG000001925_8_20
Type: CAZyme
Location: 26395 - 28707 (+)
Type: CAZyme
Location: 26395 - 28707 (+)
Gene ID: MGYG000001925_8_21
Type: pfam
Location: 28937 - 29938 (-)
Type: pfam
Location: 28937 - 29938 (-)
Gene ID: MGYG000001925_8_22
Type: TC
Location: 30371 - 32587 (+)
Type: TC
Location: 30371 - 32587 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola sp900544675
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.