Cluster: MGYG000001925_CGC11
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000001925
- CGC Family ID: CGCFAM_00367
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000001925_6 | MGYG000001925_6_75 | 87774 | 88937 | + | 3.D.5.1.1 |
| pfam | MGYG000001925_6 | MGYG000001925_6_76 | 88952 | 89632 | + | FMN_bind |
| TC | MGYG000001925_6 | MGYG000001925_6_77 | 89651 | 90289 | + | 3.D.5.1.1 |
| TC | MGYG000001925_6 | MGYG000001925_6_78 | 90308 | 90931 | + | 3.D.5.1.1 |
| TC | MGYG000001925_6 | MGYG000001925_6_79 | 90951 | 92219 | + | 3.D.5.1.1 |
| CAZyme | MGYG000001925_6 | MGYG000001925_6_80 | 92323 | 93210 | - | GH73 |
| pfam | MGYG000001925_6 | MGYG000001925_6_81 | 93330 | 93806 | + | dCMP_cyt_deam_1 | dCMP_cyt_deam_2 |
| TC | MGYG000001925_6 | MGYG000001925_6_82 | 93957 | 95576 | - | 3.A.1.121.4 |
| TC | MGYG000001925_6 | MGYG000001925_6_83 | 95780 | 96373 | + | 3.A.8.1.1 |
| sulfatase | MGYG000001925_6 | MGYG000001925_6_84 | 96392 | 97564 | + | S1_7 |
| TC | MGYG000001925_6 | MGYG000001925_6_85 | 97685 | 98926 | + | 9.B.10.1.1 |
Gene ID: MGYG000001925_6_75
Type: TC
Location: 87774 - 88937 (+)
Type: TC
Location: 87774 - 88937 (+)
Gene ID: MGYG000001925_6_76
Type: pfam
Location: 88952 - 89632 (+)
Type: pfam
Location: 88952 - 89632 (+)
Gene ID: MGYG000001925_6_77
Type: TC
Location: 89651 - 90289 (+)
Type: TC
Location: 89651 - 90289 (+)
Gene ID: MGYG000001925_6_78
Type: TC
Location: 90308 - 90931 (+)
Type: TC
Location: 90308 - 90931 (+)
Gene ID: MGYG000001925_6_79
Type: TC
Location: 90951 - 92219 (+)
Type: TC
Location: 90951 - 92219 (+)
Gene ID: MGYG000001925_6_80
Type: CAZyme
Location: 92323 - 93210 (-)
Type: CAZyme
Location: 92323 - 93210 (-)
Gene ID: MGYG000001925_6_81
Type: pfam
Location: 93330 - 93806 (+)
Type: pfam
Location: 93330 - 93806 (+)
Gene ID: MGYG000001925_6_82
Type: TC
Location: 93957 - 95576 (-)
Type: TC
Location: 93957 - 95576 (-)
Gene ID: MGYG000001925_6_83
Type: TC
Location: 95780 - 96373 (+)
Type: TC
Location: 95780 - 96373 (+)
Gene ID: MGYG000001925_6_84
Type: sulfatase
Location: 96392 - 97564 (+)
Type: sulfatase
Location: 96392 - 97564 (+)
Gene ID: MGYG000001925_6_85
Type: TC
Location: 97685 - 98926 (+)
Type: TC
Location: 97685 - 98926 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola sp900544675
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000001925_6_85 | vegan > omnivore | 1.11888 | 0.04901 |