Cluster: MGYG000001925_CGC1
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000001925
- CGC Family ID: CGCFAM_00081
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000001925_1 | MGYG000001925_1_31 | 28865 | 31240 | - | GH115 |
| TF | MGYG000001925_1 | MGYG000001925_1_32 | 31473 | 34325 | - | HTH_AraC |
| TC | MGYG000001925_1 | MGYG000001925_1_33 | 34590 | 36011 | - | 3.D.1.2.1 |
| TC | MGYG000001925_1 | MGYG000001925_1_34 | 36022 | 37503 | - | 3.D.1.2.1 |
| TC | MGYG000001925_1 | MGYG000001925_1_35 | 37500 | 39392 | - | 3.D.9.1.1 |
| TC | MGYG000001925_1 | MGYG000001925_1_36 | 39413 | 39724 | - | 3.D.1.2.1 |
| TC | MGYG000001925_1 | MGYG000001925_1_37 | 39740 | 40258 | - | 3.D.9.1.1 |
| STP | MGYG000001925_1 | MGYG000001925_1_38 | 40269 | 40736 | - | Fer4 | Fer4 |
| TC | MGYG000001925_1 | MGYG000001925_1_39 | 40749 | 41849 | - | 3.D.1.5.1 |
| TC | MGYG000001925_1 | MGYG000001925_1_40 | 41889 | 43505 | - | 3.D.1.5.1 |
| TC | MGYG000001925_1 | MGYG000001925_1_41 | 43502 | 44095 | - | 3.D.1.3.1 |
| TC | MGYG000001925_1 | MGYG000001925_1_42 | 44116 | 44466 | - | 3.D.1.8.1 |
Gene ID: MGYG000001925_1_31
Type: CAZyme
Location: 28865 - 31240 (-)
Type: CAZyme
Location: 28865 - 31240 (-)
Gene ID: MGYG000001925_1_32
Type: TF
Location: 31473 - 34325 (-)
Type: TF
Location: 31473 - 34325 (-)
Gene ID: MGYG000001925_1_33
Type: TC
Location: 34590 - 36011 (-)
Type: TC
Location: 34590 - 36011 (-)
Gene ID: MGYG000001925_1_34
Type: TC
Location: 36022 - 37503 (-)
Type: TC
Location: 36022 - 37503 (-)
Gene ID: MGYG000001925_1_35
Type: TC
Location: 37500 - 39392 (-)
Type: TC
Location: 37500 - 39392 (-)
Gene ID: MGYG000001925_1_36
Type: TC
Location: 39413 - 39724 (-)
Type: TC
Location: 39413 - 39724 (-)
Gene ID: MGYG000001925_1_37
Type: TC
Location: 39740 - 40258 (-)
Type: TC
Location: 39740 - 40258 (-)
Gene ID: MGYG000001925_1_38
Type: STP
Location: 40269 - 40736 (-)
Type: STP
Location: 40269 - 40736 (-)
Gene ID: MGYG000001925_1_39
Type: TC
Location: 40749 - 41849 (-)
Type: TC
Location: 40749 - 41849 (-)
Gene ID: MGYG000001925_1_40
Type: TC
Location: 41889 - 43505 (-)
Type: TC
Location: 41889 - 43505 (-)
Gene ID: MGYG000001925_1_41
Type: TC
Location: 43502 - 44095 (-)
Type: TC
Location: 43502 - 44095 (-)
Gene ID: MGYG000001925_1_42
Type: TC
Location: 44116 - 44466 (-)
Type: TC
Location: 44116 - 44466 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola sp900544675
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000001925_1_42 | vegetarian > vegan | 1.02737 | 0.03309 |