Cluster: MGYG000001921_CGC5
🧬 Cluster Details
- Gene Count: 22
- CAZyme Count: 10
- Substrate:
- Genome ID: MGYG000001921
- CGC Family ID: CGCFAM_01178
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000001921_1 | MGYG000001921_1_340 | 392979 | 393983 | - | GT2 |
| CAZyme | MGYG000001921_1 | MGYG000001921_1_341 | 394011 | 394859 | - | GT2 |
| NULL(UNKNOWN) | MGYG000001921_1 | MGYG000001921_1_342 | 394863 | 395402 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | MGYG000001921_1 | MGYG000001921_1_343 | 395436 | 397010 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000001921_1 | MGYG000001921_1_344 | 397036 | 398211 | - | GT4 |
| CAZyme | MGYG000001921_1 | MGYG000001921_1_345 | 398208 | 399347 | - | GT4 |
| CAZyme | MGYG000001921_1 | MGYG000001921_1_346 | 399347 | 400390 | - | GT4 |
| CAZyme | MGYG000001921_1 | MGYG000001921_1_347 | 400393 | 401223 | - | GT11 |
| pfam | MGYG000001921_1 | MGYG000001921_1_348 | 401213 | 402352 | - | Wzy_C |
| NULL(UNKNOWN) | MGYG000001921_1 | MGYG000001921_1_349 | 402393 | 403358 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000001921_1 | MGYG000001921_1_350 | 403355 | 404527 | - | GT4 |
| CAZyme | MGYG000001921_1 | MGYG000001921_1_351 | 404561 | 405739 | - | GT4 |
| CAZyme | MGYG000001921_1 | MGYG000001921_1_352 | 405736 | 406890 | - | GT4 |
| CAZyme | MGYG000001921_1 | MGYG000001921_1_353 | 406925 | 407701 | - | GT2 |
| TC | MGYG000001921_1 | MGYG000001921_1_354 | 407728 | 408570 | - | 9.B.18.1.2 |
| pfam | MGYG000001921_1 | MGYG000001921_1_355 | 408611 | 409282 | - | CpsB_CapC |
| TC | MGYG000001921_1 | MGYG000001921_1_356 | 409345 | 411747 | - | 8.A.3.1.2 |
| TC | MGYG000001921_1 | MGYG000001921_1_357 | 411877 | 412659 | - | 1.B.18.3.2 |
| TC | MGYG000001921_1 | MGYG000001921_1_358 | 413668 | 416124 | + | 3.A.12.1.1 |
| NULL(UNKNOWN) | MGYG000001921_1 | MGYG000001921_1_359 | 416144 | 416773 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | MGYG000001921_1 | MGYG000001921_1_360 | 417261 | 417836 | + | Ferritin | Rubrerythrin | RUBY_RBDX |
| TC | MGYG000001921_1 | MGYG000001921_1_361 | 417927 | 420578 | + | 9.B.14.3.3 |
Gene ID: MGYG000001921_1_340
Type: CAZyme
Location: 392979 - 393983 (-)
Type: CAZyme
Location: 392979 - 393983 (-)
Gene ID: MGYG000001921_1_341
Type: CAZyme
Location: 394011 - 394859 (-)
Type: CAZyme
Location: 394011 - 394859 (-)
Gene ID: MGYG000001921_1_342
Type:
Location: 394863 - 395402 (-)
Type:
Location: 394863 - 395402 (-)
Gene ID: MGYG000001921_1_343
Type:
Location: 395436 - 397010 (-)
Type:
Location: 395436 - 397010 (-)
Gene ID: MGYG000001921_1_344
Type: CAZyme
Location: 397036 - 398211 (-)
Type: CAZyme
Location: 397036 - 398211 (-)
Gene ID: MGYG000001921_1_345
Type: CAZyme
Location: 398208 - 399347 (-)
Type: CAZyme
Location: 398208 - 399347 (-)
Gene ID: MGYG000001921_1_346
Type: CAZyme
Location: 399347 - 400390 (-)
Type: CAZyme
Location: 399347 - 400390 (-)
Gene ID: MGYG000001921_1_347
Type: CAZyme
Location: 400393 - 401223 (-)
Type: CAZyme
Location: 400393 - 401223 (-)
Gene ID: MGYG000001921_1_348
Type: pfam
Location: 401213 - 402352 (-)
Type: pfam
Location: 401213 - 402352 (-)
Gene ID: MGYG000001921_1_349
Type:
Location: 402393 - 403358 (-)
Type:
Location: 402393 - 403358 (-)
Gene ID: MGYG000001921_1_350
Type: CAZyme
Location: 403355 - 404527 (-)
Type: CAZyme
Location: 403355 - 404527 (-)
Gene ID: MGYG000001921_1_351
Type: CAZyme
Location: 404561 - 405739 (-)
Type: CAZyme
Location: 404561 - 405739 (-)
Gene ID: MGYG000001921_1_352
Type: CAZyme
Location: 405736 - 406890 (-)
Type: CAZyme
Location: 405736 - 406890 (-)
Gene ID: MGYG000001921_1_353
Type: CAZyme
Location: 406925 - 407701 (-)
Type: CAZyme
Location: 406925 - 407701 (-)
Gene ID: MGYG000001921_1_354
Type: TC
Location: 407728 - 408570 (-)
Type: TC
Location: 407728 - 408570 (-)
Gene ID: MGYG000001921_1_355
Type: pfam
Location: 408611 - 409282 (-)
Type: pfam
Location: 408611 - 409282 (-)
Gene ID: MGYG000001921_1_356
Type: TC
Location: 409345 - 411747 (-)
Type: TC
Location: 409345 - 411747 (-)
Gene ID: MGYG000001921_1_357
Type: TC
Location: 411877 - 412659 (-)
Type: TC
Location: 411877 - 412659 (-)
Gene ID: MGYG000001921_1_358
Type: TC
Location: 413668 - 416124 (+)
Type: TC
Location: 413668 - 416124 (+)
Gene ID: MGYG000001921_1_359
Type:
Location: 416144 - 416773 (+)
Type:
Location: 416144 - 416773 (+)
Gene ID: MGYG000001921_1_360
Type: pfam
Location: 417261 - 417836 (+)
Type: pfam
Location: 417261 - 417836 (+)
Gene ID: MGYG000001921_1_361
Type: TC
Location: 417927 - 420578 (+)
Type: TC
Location: 417927 - 420578 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Verrucomicrobiales
Family
Akkermansiaceae
Genus
Akkermansia
Species
Akkermansia sp905200945
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000001921_1_341 | vegetarian > vegan | 1.21116 | 0.00540 |
| MGYG000001921_1_342 | vegetarian > omnivore | 1.32858 | 0.02115 |
| MGYG000001921_1_342 | vegetarian > vegan | 1.27561 | 0.00540 |
| MGYG000001921_1_345 | vegetarian > omnivore | 1.02735 | 0.02115 |
| MGYG000001921_1_345 | vegetarian > vegan | 1.44546 | 0.00540 |
| MGYG000001921_1_347 | vegetarian > vegan | 1.37843 | 0.00540 |
| MGYG000001921_1_349 | vegetarian > omnivore | 1.15945 | 0.02115 |
| MGYG000001921_1_349 | vegetarian > vegan | 1.03053 | 0.00540 |
| MGYG000001921_1_351 | vegetarian > omnivore | 1.28936 | 0.02115 |
| MGYG000001921_1_351 | vegetarian > vegan | 1.08601 | 0.00540 |
| MGYG000001921_1_352 | vegetarian > omnivore | 1.25620 | 0.02115 |
| MGYG000001921_1_354 | vegetarian > omnivore | 1.76294 | 0.02115 |
| MGYG000001921_1_354 | vegetarian > vegan | 1.18720 | 0.00540 |
| MGYG000001921_1_355 | vegetarian > omnivore | 1.54489 | 0.02115 |
| MGYG000001921_1_357 | vegetarian > omnivore | 1.14794 | 0.02115 |
| MGYG000001921_1_359 | vegetarian > vegan | 1.07622 | 0.00540 |