Cluster: MGYG000001921_CGC3
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000001921
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000001921_1 | MGYG000001921_1_245 | 261925 | 262662 | - | 4.F.1.1.8 |
| pfam | MGYG000001921_1 | MGYG000001921_1_246 | 262712 | 265096 | - | BRCT | DNA_ligase_aden | DNA_ligase_ZBD | DNA_ligase_OB | PTCB-BRCT | Nlig-Ia |
| CAZyme | MGYG000001921_1 | MGYG000001921_1_247 | 265121 | 266737 | - | GH29 |
Gene ID: MGYG000001921_1_245
Type: TC
Location: 261925 - 262662 (-)
Type: TC
Location: 261925 - 262662 (-)
Gene ID: MGYG000001921_1_246
Type: pfam
Location: 262712 - 265096 (-)
Type: pfam
Location: 262712 - 265096 (-)
Gene ID: MGYG000001921_1_247
Type: CAZyme
Location: 265121 - 266737 (-)
Type: CAZyme
Location: 265121 - 266737 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Verrucomicrobiales
Family
Akkermansiaceae
Genus
Akkermansia
Species
Akkermansia sp905200945
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000001921_1_245 | vegetarian > vegan | 1.23747 | 0.00540 |