Cluster: MGYG000001921_CGC18
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000001921
- CGC Family ID: CGCFAM_00013
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000001921_4 | MGYG000001921_4_179 | 212902 | 214026 | - | GT28 |
| TC | MGYG000001921_4 | MGYG000001921_4_180 | 214023 | 215165 | - | 2.A.103.1.3 |
| pfam | MGYG000001921_4 | MGYG000001921_4_181 | 215190 | 215990 | - | LysM | LysM |
| pfam | MGYG000001921_4 | MGYG000001921_4_182 | 216014 | 217324 | - | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| TC | MGYG000001921_4 | MGYG000001921_4_183 | 217337 | 218440 | - | 9.B.146.1.3 |
Gene ID: MGYG000001921_4_179
Type: CAZyme
Location: 212902 - 214026 (-)
Type: CAZyme
Location: 212902 - 214026 (-)
Gene ID: MGYG000001921_4_180
Type: TC
Location: 214023 - 215165 (-)
Type: TC
Location: 214023 - 215165 (-)
Gene ID: MGYG000001921_4_181
Type: pfam
Location: 215190 - 215990 (-)
Type: pfam
Location: 215190 - 215990 (-)
Gene ID: MGYG000001921_4_182
Type: pfam
Location: 216014 - 217324 (-)
Type: pfam
Location: 216014 - 217324 (-)
Gene ID: MGYG000001921_4_183
Type: TC
Location: 217337 - 218440 (-)
Type: TC
Location: 217337 - 218440 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Verrucomicrobiales
Family
Akkermansiaceae
Genus
Akkermansia
Species
Akkermansia sp905200945
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.