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Cluster: MGYG000001893_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000001893_12 MGYG000001893_12_5 5052 5582 + GH23
NULL(UNKNOWN) MGYG000001893_12 MGYG000001893_12_6 5604 5705 + NULL(UNKNOWN)
[View Structural Homologs]
pfam MGYG000001893_12 MGYG000001893_12_7 5832 6932 + Bmp
TC MGYG000001893_12 MGYG000001893_12_8 6990 8567 + 3.A.1.2.12
TC MGYG000001893_12 MGYG000001893_12_9 8568 9854 + 3.A.1.2.17
TC MGYG000001893_12 MGYG000001893_12_10 9854 10864 + 3.A.1.2.12
pfam MGYG000001893_12 MGYG000001893_12_11 10982 12781 + Radical_SAM | Radical_SAM_N | DUF3362
TC MGYG000001893_12 MGYG000001893_12_12 12852 14567 + 4.C.1.1.4
Gene ID: MGYG000001893_12_5
Type: CAZyme
Location: 5052 - 5582 (+)
Gene ID: MGYG000001893_12_6
Type:
Location: 5604 - 5705 (+)
Gene ID: MGYG000001893_12_7
Type: pfam
Location: 5832 - 6932 (+)
Gene ID: MGYG000001893_12_8
Type: TC
Location: 6990 - 8567 (+)
Gene ID: MGYG000001893_12_9
Type: TC
Location: 8568 - 9854 (+)
Gene ID: MGYG000001893_12_10
Type: TC
Location: 9854 - 10864 (+)
Gene ID: MGYG000001893_12_11
Type: pfam
Location: 10982 - 12781 (+)
Gene ID: MGYG000001893_12_12
Type: TC
Location: 12852 - 14567 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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