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Cluster: MGYG000001893_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000001893_2 MGYG000001893_2_16 13012 14439 + GH25
NULL(UNKNOWN) MGYG000001893_2 MGYG000001893_2_17 14460 15497 + NULL(UNKNOWN)
[View Structural Homologs]
STP MGYG000001893_2 MGYG000001893_2_18 15846 17531 - Fer4
TC MGYG000001893_2 MGYG000001893_2_19 17547 19535 - 3.D.1.5.1
TC MGYG000001893_2 MGYG000001893_2_20 19536 20009 - 3.D.1.5.1
pfam MGYG000001893_2 MGYG000001893_2_21 20143 21051 - SBF | Mem_trans
TF MGYG000001893_2 MGYG000001893_2_22 21309 21845 + HTH_3
TC MGYG000001893_2 MGYG000001893_2_23 21852 22919 + 3.A.1.11.8
TC MGYG000001893_2 MGYG000001893_2_24 22912 23724 + 3.A.1.11.2
TC MGYG000001893_2 MGYG000001893_2_25 23721 24500 + 3.A.1.11.7
TC MGYG000001893_2 MGYG000001893_2_26 24497 25540 + 3.A.1.11.8
pfam MGYG000001893_2 MGYG000001893_2_27 25738 26619 + 2-oxoacid_dh
TC MGYG000001893_2 MGYG000001893_2_28 26606 28330 + 4.C.1.1.4
TC MGYG000001893_2 MGYG000001893_2_29 28378 30378 - 3.A.23.1.1
TC MGYG000001893_2 MGYG000001893_2_30 30597 32027 + 2.A.35.2.1
Gene ID: MGYG000001893_2_16
Type: CAZyme
Location: 13012 - 14439 (+)
Gene ID: MGYG000001893_2_17
Type:
Location: 14460 - 15497 (+)
Gene ID: MGYG000001893_2_18
Type: STP
Location: 15846 - 17531 (-)
Gene ID: MGYG000001893_2_19
Type: TC
Location: 17547 - 19535 (-)
Gene ID: MGYG000001893_2_20
Type: TC
Location: 19536 - 20009 (-)
Gene ID: MGYG000001893_2_21
Type: pfam
Location: 20143 - 21051 (-)
Gene ID: MGYG000001893_2_22
Type: TF
Location: 21309 - 21845 (+)
Gene ID: MGYG000001893_2_23
Type: TC
Location: 21852 - 22919 (+)
Gene ID: MGYG000001893_2_24
Type: TC
Location: 22912 - 23724 (+)
Gene ID: MGYG000001893_2_25
Type: TC
Location: 23721 - 24500 (+)
Gene ID: MGYG000001893_2_26
Type: TC
Location: 24497 - 25540 (+)
Gene ID: MGYG000001893_2_27
Type: pfam
Location: 25738 - 26619 (+)
Gene ID: MGYG000001893_2_28
Type: TC
Location: 26606 - 28330 (+)
Gene ID: MGYG000001893_2_29
Type: TC
Location: 28378 - 30378 (-)
Gene ID: MGYG000001893_2_30
Type: TC
Location: 30597 - 32027 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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